Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02319 ATGTCTCGCCGCGGTGGCAATCGACAACCTGAAAACCGCCGATCTCAACCATCTCCTCCCACATCATCGCATTCAATCCGAGGCGGTAGAGCTGGACGAGGCCGAGGTGGAACTCATGTTTCCGTCTCCCCTCCGGCGCCTTCGCCTGCGTCGTATCCCCCTCTTTCATCAGTAGTTCCTCCATCAAGGCCTTCCGAAGCTTCCTCCAGCTCCTCACCTCCGCAGCCACATATGCCTTCCTCGGCTGCTTCATCCGTTGTTTCGTCTTCGGCTCCAGTGGCTGCTTTATCTTCTGAGCTTGAGCAGGGGCTTACATTGCATCCTTCAGTGCCGTCATCGTCGAAAGCTATAAGGTTTCCCGACCGGCCGAATTACggtaaaatgggaaaaaaaactCTAGTTCGTGCGAATCATTTTTCGGTGCAAGTTGCAAACCGTGATATCCATCACTATGATGTGTCTATTACGCCGGAGATTACTTCGAAGAACATCAACAGAAAAGTGATgacacaattaataaaattgcatcGTGAGTCACACCTGGGAAAACATCTACCAGCTTATGATGGCCGAAAGAGTCTTTTCACAGGAGGCCCTTTACCCTTCCAGTCAAAGGAGTTTGTGGTCAAGTTGCCAGACAAAGATGAACAAGCCACATCTTCTGATTCAGCTAGAAAAGAACGTGAGTTTAGGGTCACCATTCGATATGCTTCTAAGGCTGATATGCATCATCTACAACAATTTCTAGCGCGTTTACAGCTGGATGTTCCACAAGAAACCATACAAGCACTTGATGTAGCTCTAAGGGCATCACCAGCTGAAAAGTTTACTGTTGTGGGGAGGTCATTTTTTTCACCACTTTTGGGGCAGAAGGGTGAGCTTGGCTATGGCCTAGAATATTGGAGGGGATATCATCAAAGCCTTCGCCCAACCCAAATGGGACTTTCCCTAAATATAGatGTGTCCGCAAGATCATTCTATGAAGAAATCCTTGTGACCGAGTTTATCGGAAAACATTTTAATTGCAATCTTTCAAGGCGCCTTTCTGATCAAGATCGTGCTAAGGTTAAGAAGGCCTTGAGAGGAGTCAAGATAGATTTTATCCGCAGTGGGTATAGAAGGAGTTATAAAGTCTCTGGAATCTCAAAAGAGCCACTCAGCGAGTTAAAgTTTACGCTTGAtgataagaaaacaaagacgTCAGTGGTTCAATATTTCCGTGAGAAGTACAATATTGCGCTAAAGTATTTGGCTCTTCCTGCCCTCCAATCTGGCAGTGACACGAAGCCAGTCTATTTGCCTATGGAGCTATGTCAAATTGCTGCTGGACAGAGATATTCCAAGAGATTAAATGAGACGCAAGTGACTGCTCTTCTAAAGGCAACCTGTCAGCGTCCCCACGAGAGGGAAGCATCCATTAAGCAGATGGTTCGTCGAAACAACTTCAGTAGAGACGAGCTTGTGCATAAGGAATTTGGAATTCAAGTGACGGAAGAACTAGCATTGATTGAAGCTCGTGTTTTGCCTGCACCAACGCTTAAATATCATGATACTGGGAAAGAACCAAGGGTTGACCCCAGGATGGGGCAATGGAATATGATAAATAAGAAAATGGTTGATGGTGGCAAGGTGCAATATTGGACTTGTCTTAACTTTTCCACACGAGTCGACAGAGACTTGCCATTTCAATTTTGTCATGAGTTGGTCAACATGTGTACCAGCAAGGGAATGATTTTCAATCGAGATCCTTTGATTCCAATCAGCTCAGCTAATTCTCGTCAAATAGATAATGCCCTCCTCAATATTCACAATCAGTCTGTGGCCAAACTTAAAAGCATGCAGAAGGGTGAGGAGAAACTTCAGttgttgataataattttgcCTGACATCCGTGGGTCATATGGACCAATAAAACGCATATGTGAAACAGAACTGGGAATTGTGTCGCAATGCGTTCAACCCAGGCAAGCTTCAAGGCTAAATAAGCAGTATCTAGAAAATGTGGCTTTGAAGATAAATGTCAAGATGGGCGGACGAAACACAGTTTTAAACGATGCAGTTCTCAGAAGAATTCCACTTGTGACTGATAGGCCTACAATAATCTTTGGTGCCGATGTAACACATCCACAACCAGGAGAGGACTCAAGCCCATCTATAGCAGCGGTAGTGGCATCCATGGATTGGCCAGAGATCACAAAGTACAGGGGACTTGTGTCTGCTCAGTCTCACCGTGAGGAAATTATTGAAGATCTCTATAAATGTTTTATAGATCCTAAAAAGGGAGTTGTCCATAGTGGAATGATTAGGGAGCTGCTTCTTGCATTCCATAGAACAACCGGCTTAAAACCTGATAGGATTATATTCTACAGAGATGGAGTCAGTGAAGGTCAATTTAGTCAGGTTCTACTTTATGAGATGGAGGCAATAAGAAAGGCCTGTGCCTCATTAGAGAAAGGATATTTACCACGAGTTACCTTTGTGGTGGTACAGAAAAGACACCACACCCGTCTCTTTCCTGCAGATTATAATAGTCGTGATCAGATGGATAGAAGTGGAAATATTCTGCCAGGTACTGTTGTTGATACGCATATTTGCCACCCTAGAGAGTTTGACTTTTATCTCAACAGCCATGCCGGAATTCAGGGAATGAACCGGCCTGCGCACTATCATGTACTTTTTGACGAAAACCACTTCAATGCTGATCAGCTGCAGAGCTTTACAAACAATTTGTGTTACACGTTTGCAAGGTGCACTCGATCTGTTTCGTTAGTTCCTCCTGCTTATTATGCACACTTGGCAGCTTTTCGAGCTCGCTACTACATTGAAGGAGGTGAATCAGAGTCTGATTCCGGGAGCGGATCTAGGGGCGCTGGCGCTCGTGCTCTTCCGCAAATCAAGGAGAACGTCAAAGATGTCATGTTTTACTGCTG 2930 0.4396 MSRRGGNRQPENRRSQPSPPTSSHSIRGGRAGRGRGGTHVSVSPPAPSPASYPPLSSVVPPSRPSEASSSSSPPQPHMPSSAASSVVSSSAPVAALSSELEQGLTLHPSVPSSSKAIRFPDRPNYGKMGKKTLVRANHFSVQVANRDIHHYDVSITPEITSKNINRKVMTQLIKLHRESHLGKHLPAYDGRKSLFTGGPLPFQSKEFVVKLPDKDEQATSSDSARKEREFRVTIRYASKADMHHLQQFLARLQLDVPQETIQALDVALRASPAEKFTVVGRSFFSPLLGQKGELGYGLEYWRGYHQSLRPTQMGLSLNIDVSARSFYEEILVTEFIGKHFNCNLSRRLSDQDRAKVKKALRGVKIDFIRSGYRRSYKVSGISKEPLSELKFTLDDKKTKTSVVQYFREKYNIALKYLALPALQSGSDTKPVYLPMELCQIAAGQRYSKRLNETQVTALLKATCQRPHEREASIKQMVRRNNFSRDELVHKEFGIQVTEELALIEARVLPAPTLKYHDTGKEPRVDPRMGQWNMINKKMVDGGKVQYWTCLNFSTRVDRDLPFQFCHELVNMCTSKGMIFNRDPLIPISSANSRQIDNALLNIHNQSVAKLKSMQKGEEKLQLLIIILPDIRGSYGPIKRICETELGIVSQCVQPRQASRLNKQYLENVALKINVKMGGRNTVLNDAVLRRIPLVTDRPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEITKYRGLVSAQSHREEIIEDLYKCFIDPKKGVVHSGMIRELLLAFHRTTGLKPDRIIFYRDGVSEGQFSQVLLYEMEAIRKACASLEKGYLPRVTFVVVQKRHHTRLFPADYNSRDQMDRSGNILPGTVVDTHICHPREFDFYLNSHAGIQGMNRPAHYHVLFDENHFNADQLQSFTNNLCYTFARCTRSVSLVPPAYYAHLAAFRARYYIEGGESESDSGSGSRGAGARALPQIKENVKDVMFYC 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02319 976 MobiDBLite consensus disorder prediction 61 85 - -
Bva07g02319 976 SUPERFAMILY Ribonuclease H-like 617 942 IPR012337 -
Bva07g02319 976 Pfam Mid domain of argonaute 526 603 IPR032473 -
Bva07g02319 976 ProSiteProfiles Piwi domain profile. 622 942 IPR003165 GO:0003676
Bva07g02319 976 MobiDBLite consensus disorder prediction 104 123 - -
Bva07g02319 976 Pfam PAZ domain 353 458 IPR003100 GO:0005515
Bva07g02319 976 SUPERFAMILY PAZ domain 133 481 IPR036085 GO:0005515
Bva07g02319 976 SMART DUF1785_2 277 329 IPR014811 -
Bva07g02319 976 SMART PAZ_2_a_3 330 458 IPR003100 GO:0005515
Bva07g02319 976 MobiDBLite consensus disorder prediction 1 85 - -
Bva07g02319 976 CDD Piwi_ago-like 490 941 IPR045246 -
Bva07g02319 976 Pfam Argonaute linker 1 domain 279 328 IPR014811 -
Bva07g02319 976 ProSiteProfiles PAZ domain profile. 330 442 IPR003100 GO:0005515
Bva07g02319 976 SMART Piwi_a_2 622 942 IPR003165 GO:0003676
Bva07g02319 976 Gene3D - 691 976 IPR036397 GO:0003676
Bva07g02319 976 Pfam N-terminal domain of argonaute 130 268 IPR032474 -
Bva07g02319 976 Pfam Piwi domain 624 941 IPR003165 GO:0003676
Bva07g02319 976 PANTHER PROTEIN ARGONAUTE 1D 63 956 - -
Bva07g02319 976 Gene3D - 507 685 - -
Bva07g02319 976 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 63 956 - -
Bva07g02319 976 MobiDBLite consensus disorder prediction 11 25 - -
Bva07g02319 976 Gene3D paz domain 324 446 - -
Bva07g02319 976 CDD PAZ_argonaute_like 332 441 - -
Bva07g02319 976 MobiDBLite consensus disorder prediction 46 60 - -
Bva07g02319 976 Pfam Argonaute linker 2 domain 468 515 IPR032472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02319 Bva-Chr7 19025754 19031893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02319 39 976 Eukaryotic Initiation Factors Gene Family AT1G48410 56.504 0.0 1086
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02319 K11593 - jre:109001082 1311.59