Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02317 ATGGCGGAGGACCGGAACGGCGACAGAAATGAGGGCAGTGATTATACTTCAGAGGACGAAGGAACTGAGGATTATAGGCGAGGAGGATACCATGCGGTTCGAATTGGcgatactttaaaaaatggtTGCTATGTTATACAGAGTAAGCTCGGTTGGGGTCATTTTTCCACTGTGTGGCTCGCTTGGGATACTCAGAGATCGCTCTATGTAGctctaaaaattcaaaagagtGCTCAGCACTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAGATTGCTGAGGGGGATGCGGATGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTCAAGCATTCAGGGCCTAACGGGCAGCATGTATGTAtggtttttgaatttttgggcgACAATCTTCTGACCCTTATCAAGTATAGTGATTACCGAGGGGTTCCTCTCTCCATGGTTAAAGAGAtttgtttccatattttgGTGGGTTTGGATTCCTTGCATCGTGAACTTTCTATAATTCACACAGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCGAAGATTGATCCCTCCAAGGATCCTAGAAAATCTGGAGCTTCACTTATCCTCCCAAATAACGGGGATAATAATGTgaccacaaaagaaaacaaaagtttgAATGGAGATATGACTAAgaaccagaaaaagaaaatgcgaAAAAAGGCTTATAAGGCGGCTCAAGGTGGTGCTGGGAAAGAAAATCCTGAGGAAGCCGAGGAGGATTCCAAAGCACCAGGCCAAGAAGATTCTTGTAATGATGTAAAATCAAATGACGAACCTGTTGAAGATCGACCAAGTACTCCTCTGAGTAAAGATGAATCAGCAAAGATTGATAATTCTGTGAATAAAGATGAATCAACTAAGATCATTGAAGCCAAGGATGTTCCTGAAGCAAGTCATGGTCACAGGAGAGGTAGTCGTTCCACAAGGAAAAAGTTGCTTGCAGCTGTTGATCTTAAATGCAAGCTGGTTGATTTTGGAAATGCTTGTTGGACTTATAAACAGTTCACAAATGATATTCAGACTAGGCAGTATAGGTGTCCTGAGGTTATACTTGGATCAAAATACTCAACTTCAGCAGATTTATGGTCCTTCGCTTGCATTTGCTTTGAACTTGCCACTGGCGATGTTCTTTTTGATCCTCACAGTGGTGAGAACTATGATAGGGATGAGGATCACCTGGCATTGATGATGGAGCTTCTTGGAATGATGCCTCGCAAGATTGCACTAGGTGGCCGCTATTCCCGGGAATTTTTCAATAGATATGGTGATTTAAGGCACATCCGTCGGTTGCGATTCTGGCCTCTTAATAAGGTGCTGATGGAGAAGTATGATCTCAGCGAGCAAGACGCAATTGACATGGCTCATTTCCTTGTTCCGATACTTGATTTTGTCCCTGAAAAGAGACCAACAGCTGCTCAGTGCCTCAATCATCCATGGATGAGTGCAGGTCCTCGGGTTCTTGAGCCCTCTTTGAATATAATACAACCTGAGGCAACAGACGGGGGACTGTctgaaaagatgaagaaagaaaaggctGATCAGGAGGCAGTAGAAGTTGGTATGGGGAATATAGCCATAGATGCAACTGCCAAGCGGCTCTG 1640 0.4037 MAEDRNGDRNEGSDYTSEDEGTEDYRRGGYHAVRIGDTLKNGCYVIQSKLGWGHFSTVWLAWDTQRSLYVALKIQKSAQHYTEAAMDEIKILKQIAEGDADDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLSMVKEICFHILVGLDSLHRELSIIHTDLKPENVLLLSKIDPSKDPRKSGASLILPNNGDNNVTTKENKSLNGDMTKNQKKKMRKKAYKAAQGGAGKENPEEAEEDSKAPGQEDSCNDVKSNDEPVEDRPSTPLSKDESAKIDNSVNKDESTKIIEAKDVPEASHGHRRGSRSTRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGENYDRDEDHLALMMELLGMMPRKIALGGRYSREFFNRYGDLRHIRRLRFWPLNKVLMEKYDLSEQDAIDMAHFLVPILDFVPEKRPTAAQCLNHPWMSAGPRVLEPSLNIIQPEATDGGLSEKMKKEKADQEAVEVGMGNIAIDATAKRL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02317 546 MobiDBLite consensus disorder prediction 1 23 - -
Bva07g02317 546 CDD STKc_SRPK 33 493 - -
Bva07g02317 546 PANTHER SERINE KINASE-LIKE PROTEIN 11 545 - -
Bva07g02317 546 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 545 - -
Bva07g02317 546 SMART serkin_6 44 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02317 546 SUPERFAMILY Protein kinase-like (PK-like) 39 503 IPR011009 -
Bva07g02317 546 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Bva07g02317 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Bva07g02317 546 MobiDBLite consensus disorder prediction 245 315 - -
Bva07g02317 546 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Bva07g02317 546 MobiDBLite consensus disorder prediction 201 219 - -
Bva07g02317 546 Pfam Protein kinase domain 330 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02317 546 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02317 546 ProSiteProfiles Protein kinase domain profile. 44 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02317 546 Gene3D Transferase(Phosphotransferase) domain 1 127 494 - -
Bva07g02317 546 MobiDBLite consensus disorder prediction 187 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02317 Bva-Chr7 19013897 19017508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02317 1 545 EF-hand Containing Proteins AT5G22840 66.545 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Bva07g02317 Pkinase 8.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02317 K08832 - gmx:100791829 867.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00327 09 1691002 1694645 Bva07g02317 07 19013897 19017508 BWGD
Bva07g02317 07 19013897 19017508 Bva07g02317 07 19013897 19017508 ECH