Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02307 ATGGAACCCCAAGTTGTCAGATCGAGGGGTCGGCCAAGGAAACGGATGAGAAAAGAAGATCAAAGTGGGACTGATGATAAAAAATCGGGCCCTGAAATGAAAAAGCAGGTTGTTGTGACAAGGCCAATAGCATTGGTTGGGCGATACGTACTGAAAGAGTTGGAAGGAAGTGGAATTTTTCTCGGTAAAGTTGTATATTATGATTATGGATCATACAGAGTCAATTACGAGGATGGAGATTGTGAGGATAAGGATAGCAGTGAGATTCGTACAATACTTCTCAATGACGGTGACTTTGATGATGATTTGACTCAGAGAAGGAGTAAATTAGATGACTTAGTGTTGAAGAATAGCGTCAAGATTAAAGAGGAGCAGGAGAAGAGTTCTGTAGATCCAAATAATGGTGTATCGAGTGAATTGCATGGTGGGTTGTCAATTGAAAACGAAGTGCAAGTTGAAGGGGATGCTGATTCATCTAGTGATTCAAGTGCGTGTTCAAAGGAAAGGGATTCTGGGTCTGATGTGGAGACACCACCTCCACCACCATTACAGTTGCCTCCATCTTCAGGGACTATTGGTGTTCCTGAGCAGTATGTTTCGTATCTTTTTTCAGTTTATGGGTTCTTGCGATCATTCAGCATTCGTTTGTTTATAAGCCCGTTTTCTTTGGATAATTTTGTTGGTTCACTTAATTGCCGAGTTTCAAACATGTTGTTTGATGCCATTCATGTTTCCTTGATGCGTGCATTGAGGCGCCATCTTGAAATGCTGTCATCTGATGGCTCAGAGCGTGCATCAAAGTGCCTGAGgtGCAATGATTGGAGCTTGCTAGATACATTGACTTGGCCAGTTTTTGTGATCCAGTATTTAGCAGTTAATGGATATACAAAGGGACCTGAATGGAAAGGATTTTATGAAGAGATTTTTAATAGtgaatattatttgttacCTGTAAGTAGGAAGTTAATCATATTGCAAATTCTCTGTGATGATGTCTTCGAGTCTGAGGAGTTAGGAGCTGAAATGAATATGCGTGAGGAATCAGAGGTTGGGGTGGATTATGATTCAGAAGATATACTTCATCTGGAAAATGTTCCAAGAAGAGTTCATCCTAGATATGCCAAAACTTCTGCTCGCAAGGATAAAGACTCAATTAAGTTTACTCCAGAATCAAATGCCGTGAAGCTATCTGGTAATTCAGTTTTGGGTACCAGAAATGGTGAAAGGAATGACGATGCTGATGGTGACAGAAATGTCGATGAATGTCGCCTCTGTGGTATGGATGGGACCTTGCTTTGCTGTGATGGATGTCCGTCTGCATATCATTCGAGGTGTATCAGTGTGATGAAGATGTTTATACCAGAAGGCCCATGGTATTGTCCAGAATGCAATATTAGTACGATAGGGCCAGCAATTACGAAGGGAACATCACTTAGAGGGGCTGAAATATTTGGAAAAGATTTGTTTGGACAAGTCTTCATGGGTACTTGTGACCACTTGCTGGTGCTCAATATCAACGGTGAATTTCGTCTCAGATATTACAATCAGAATGACATTCCTAAAGTTCTCCAAGTCCTTTGTGCATCCCCTGAGCATGTCCctttatattataacattTGCAAGGCAGTTTTACAATATTGGAATATTCCAGAAAGTGTCTTGCCTCTGACTGATACAACTGGAGCAGATTTAAACTCAGCGAATACAGAAGAGGATGCAAAGTTCTCTAGTTTATTACTTCCTTCTTTAGGTGAAGAAGAGTGTAAAGACGTTAATTTGATAAAGGCAGAGTGCACCGTTAGTACTATGGATGAGACTCATAGCAATAATATGGCGCCTTCTCTTGATGCCTCATTTCCTACCACTGAAAGAAGGGCTCCTGTTAGTCATCAGGGTGAACTTTCTGCCATGAACTACCAAAGTTATGTTGATAGATTGACTGCAGCGGATCCCGCTACGTGCACCTTCGTAAGCAGCCGTTTTAGTTATTCTCAGAACGCAAATGATATGAGGTTGCCTATGAATTCGTCCTCGCAAATCAAAGAAGGCAACCGTGCTGGTTCTGGAAAAAGTGAACACAATGTAACTagtgattttatatacatGGGTTCCTCCTACAAACCTCAGGCATACATTAATTACTATATGCATGGTGATTTTGCTGCTTCTGCTGCCGCTAAATTGGCTGTTCTCTCTTCTGAGAATTCTAGGTCAGAGGGTCTTGTGTCAGAGAATCTTAAGAAAGTCACATCTGGAAACACTTTTCTGCAAGCAAAAGCATTCTCACTAACAGCTTCGCGTTTCTTTTGGCCAAGTTCTGAAAAGAAGCTTGTGGAGGTTCCAAGAGAGAGATGTGGTTGGTGCCTTTCTTGTAAAGCGCCTCCTTCAAGCAAGAGAGGATGCATGTTAAATCATGCGGCTATAAGTGCCACTAAAATTGCTACGAAAATCCTTGCTGGCTTTTGTCCTGTAAGGAGTGGATGGGGAATACTTTCTAGCATTGCAacatacattatatatatggagGAAAGTTTACGTGGTTTGGTGGTTGGGCCCTTTGAAAGTATAAACTATAGAAAGCAGTGGCGCAAACAAGTGGAACAGGCCAGAACATTCAGGGCTATAAAGCCCCTTTTGGTTGAACTGGAGGAGAACATTCGTACAATTACTTTTGCTGGGGACTGGGTCAAGCTGATGGATAATTGGTTGGTTGAATCTTCAATATTTCAAAGTATTGCTTGCGCAACGACACAGAAACGCATACCTGGGAGGCGTAAAAAGAAACAGCTAGCTATTGATGAAGTCACTGCCGATGGTTTCAACGAGAACAACTTTATGTGGTGGCATGGTGGGAAATTCACCAAGTTTATATTTCAGAAAGCAGTTTTACCAAAATCCATGATCAGAAAAGCAGCTCGCCAAgGTGGGTGGACGAATATTTTTGGACTTCTCTATGCTGATGGCTCTGAAATTCCTAATATAAGGAGACGGCTGATTTGGAGAGCTGCAGTCCAAATGAGTAGGAATGCATCACAACTTGCTCTTCAGGTCAGATACCTAGATTTTCACCTTAGATGGAGTGATCTGATTCGTCCAGAGCAGAACCTTCAGGATGGGAAAGGTCAAGAGACCGAAGCTTCTGCTTTTAGAAATGCAAATATTTGTGATAAAAAACTTGTAGAGGGGAAACTTTTATATGGAATTGCTTTTGGGAGTCAAAAGCATCTTCCTTCTCGcgttatgaaaaatattattgaaatagaGATTGGTCCAGAAGGAAGGGAAAAATATTGGTTTTCTGAAGCTCGCATTCCTTTATATTTGGtaaaagagtatgaagaaGGCATGGTTAAAGTACCATTAGATAAAGGGAACTTGAATTTGGCATCTAAGTTGAGCCAAAAGAGGTTGAAAGCTTCCTGCGgggatatatttttttatctcgtCTGCAAGAGAGACAAATTGGACATGTTATCATGTTCGGTGTGTCAGCTTGGTGTTGTAACTGGGAATGCTCTCAAGTGTGGTGCATGTCAAGGTTATTGTCATGAGAGCTGTTCTGTAAGTTCAACAATCTCTACAAATGAGGAAGTGGAGTTCTTGTCCACGTGCAAGCAATGTTATAATGCCAAATTACTTACTCAAAAAGTGATCAGTAATGAATCTCCAACAAGTCCCTTGCTCTTGCAAAGGCGAGAGCATGGCTCTGTCACAGTTTCAAAGGGACCAAGGCCGAAATGTTATGATCAAACATTGACATTTACTAGGACAAAGGATACTTGTCATGACATGAAACTAGGCGCTTCTGATTCTGCTGTGACAACAAAATCACGTCGCAGAAATTGTTCTTGGGGCGTTAtatggaaaaagaagaatcatgATAATACAGGCATTGATTTTAGGctaaagaatataattttgaagggAGGTTCAGGTGTGCCTCAATTGGAACCTGTTTGTCACTTGTGCCATAAGCCATATAGGCCTGATCTTGTGTATATTTGCTGTGAGACATGCAAAAATTGGTATCATGCTGAAGCTGTCGAGCTTGAGgaatcaaaaatttcaaatgtgTTAGGCTTCAAGTGTTGCAAGTGTCGCAGGATAAAATCACCTGTGTGTCCTTACTctgatttgaaaaataaaatgagagagGGCAAGACACATTCAAGGTTTTTAAAGAACGAGCATTCTGGAGCAGATTCTGATTCTGGAATTCTTTCTGAACTGAAAGAGTGTGGGCATGCTACCCCTGTCTTTCCTGTAGAGGATGCATGTAGAGAAGATAATGACCCTctgcttttctctctttcgAGAGTTGAGCTGATAACAGAACCTAATGCAAAAGCGGATGTTGAGTTGATTGCTGCTTCTGTGCCAGGACCTCAGAAACTACCAGTGCGAAGGCACGTTAAGCGTGGAGGGGATGGTGAGGGTTCTTGTAGAAGTAAATTTACCAGTGCTGAATTTTCAACATCTTGTGAAACAAGTAATCTGTCCAAACATGCTGAGAAGGCATCATCCCCTTCTGTAGAATTTGACTCTACTGTGCCCCTAGACAGTAGCAATGCGCTGAACAACTGTGAAAGTGTAAATTATGAATACATGGAGTTTGAACCCCACACCTACTTCTCTCAAACAGAATTGCTTCCACCAGATGATAGTTGTCAGTCTGAGGGCGCCGATGCTTATGGGGACTTGTCAGACTATTTGGGAAATCCTTGTACACAGGCCGGAGTTCCCGAAGAATGTGGGACAGTTAACTTGATAGATAACAATGAACCTTATAAATGTTGGCAATGTTCACAGATGGAACCATTGCCTGATCTGTCTTGTGAGATTTGTGGGATTTGGATTCACAGCCAATGTTCTCCTTGGGTCGAATCACCTTCGAGGTTAGGAAGATGGAGGTGTGGAAATTGCCGGGAATGGCGATA 4937 0.4021 MEPQVVRSRGRPRKRMRKEDQSGTDDKKSGPEMKKQVVVTRPIALVGRYVLKELEGSGIFLGKVVYYDYGSYRVNYEDGDCEDKDSSEIRTILLNDGDFDDDLTQRRSKLDDLVLKNSVKIKEEQEKSSVDPNNGVSSELHGGLSIENEVQVEGDADSSSDSSACSKERDSGSDVETPPPPPLQLPPSSGTIGVPEQYVSYLFSVYGFLRSFSIRLFISPFSLDNFVGSLNCRVSNMLFDAIHVSLMRALRRHLEMLSSDGSERASKCLRCNDWSLLDTLTWPVFVIQYLAVNGYTKGPEWKGFYEEIFNSEYYLLPVSRKLIILQILCDDVFESEELGAEMNMREESEVGVDYDSEDILHLENVPRRVHPRYAKTSARKDKDSIKFTPESNAVKLSGNSVLGTRNGERNDDADGDRNVDECRLCGMDGTLLCCDGCPSAYHSRCISVMKMFIPEGPWYCPECNISTIGPAITKGTSLRGAEIFGKDLFGQVFMGTCDHLLVLNINGEFRLRYYNQNDIPKVLQVLCASPEHVPLYYNICKAVLQYWNIPESVLPLTDTTGADLNSANTEEDAKFSSLLLPSLGEEECKDVNLIKAECTVSTMDETHSNNMAPSLDASFPTTERRAPVSHQGELSAMNYQSYVDRLTAADPATCTFVSSRFSYSQNANDMRLPMNSSSQIKEGNRAGSGKSEHNVTSDFIYMGSSYKPQAYINYYMHGDFAASAAAKLAVLSSENSRSEGLVSENLKKVTSGNTFLQAKAFSLTASRFFWPSSEKKLVEVPRERCGWCLSCKAPPSSKRGCMLNHAAISATKIATKILAGFCPVRSGWGILSSIATYIIYMEESLRGLVVGPFESINYRKQWRKQVEQARTFRAIKPLLVELEENIRTITFAGDWVKLMDNWLVESSIFQSIACATTQKRIPGRRKKKQLAIDEVTADGFNENNFMWWHGGKFTKFIFQKAVLPKSMIRKAARQGGWTNIFGLLYADGSEIPNIRRRLIWRAAVQMSRNASQLALQVRYLDFHLRWSDLIRPEQNLQDGKGQETEASAFRNANICDKKLVEGKLLYGIAFGSQKHLPSRVMKNIIEIEIGPEGREKYWFSEARIPLYLVKEYEEGMVKVPLDKGNLNLASKLSQKRLKASCGDIFFYLVCKRDKLDMLSCSVCQLGVVTGNALKCGACQGYCHESCSVSSTISTNEEVEFLSTCKQCYNAKLLTQKVISNESPTSPLLLQRREHGSVTVSKGPRPKCYDQTLTFTRTKDTCHDMKLGASDSAVTTKSRRRNCSWGVIWKKKNHDNTGIDFRLKNIILKGGSGVPQLEPVCHLCHKPYRPDLVYICCETCKNWYHAEAVELEESKISNVLGFKCCKCRRIKSPVCPYSDLKNKMREGKTHSRFLKNEHSGADSDSGILSELKECGHATPVFPVEDACREDNDPLLFSLSRVELITEPNAKADVELIAASVPGPQKLPVRRHVKRGGDGEGSCRSKFTSAEFSTSCETSNLSKHAEKASSPSVEFDSTVPLDSSNALNNCESVNYEYMEFEPHTYFSQTELLPPDDSCQSEGADAYGDLSDYLGNPCTQAGVPEECGTVNLIDNNEPYKCWQCSQMEPLPDLSCEICGIWIHSQCSPWVESPSRLGRWRCGNCREWR 1645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02307 1645 MobiDBLite consensus disorder prediction 152 190 - -
Bva07g02307 1645 PANTHER PHD FINGER FAMILY PROTEIN 1 1642 - -
Bva07g02307 1645 SMART testlast3 196 256 IPR018501 -
Bva07g02307 1645 CDD PHD_SF 1598 1641 - -
Bva07g02307 1645 ProSiteProfiles DDT domain profile. 196 256 IPR018501 -
Bva07g02307 1645 SMART PHD_3 421 464 IPR001965 -
Bva07g02307 1645 SMART PHD_3 1159 1208 IPR001965 -
Bva07g02307 1645 SMART PHD_3 1319 1367 IPR001965 -
Bva07g02307 1645 SMART PHD_3 1597 1642 IPR001965 -
Bva07g02307 1645 Pfam PHD-finger 422 464 IPR019787 -
Bva07g02307 1645 CDD PHD2_CHD_II 422 463 - -
Bva07g02307 1645 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 412 467 IPR013083 -
Bva07g02307 1645 Pfam DDT domain 198 253 IPR018501 -
Bva07g02307 1645 SUPERFAMILY FYVE/PHD zinc finger 416 470 IPR011011 -
Bva07g02307 1645 MobiDBLite consensus disorder prediction 672 692 - -
Bva07g02307 1645 ProSitePatterns Zinc finger PHD-type signature. 422 463 IPR019786 -
Bva07g02307 1645 ProSiteProfiles Zinc finger PHD-type profile. 419 466 IPR019787 -
Bva07g02307 1645 MobiDBLite consensus disorder prediction 15 34 - -
Bva07g02307 1645 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1309 1384 IPR013083 -
Bva07g02307 1645 PANTHER DNA-BINDING AND ZINC-FINGER PROTEIN 1 1642 - -
Bva07g02307 1645 SUPERFAMILY FYVE/PHD zinc finger 1315 1373 IPR011011 -
Bva07g02307 1645 MobiDBLite consensus disorder prediction 1 34 - -
Bva07g02307 1645 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 306 337 IPR028942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02307 Bva-Chr7 18954710 18961947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02307 286 581 EF-hand Containing Proteins AT5G22760 49.669 2.41e-81 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Bva07g02307 DDT 1.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02307 - - gmx:100808614 1998.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00336 09 1742299 1750043 Bva07g02307 07 18954710 18961947 BWGD
Bva07g02307 07 18954710 18961947 Bva07g02307 07 18954710 18961947 ECH