Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02292 ATGGACTTTGAGAATATtgaatcttcatcttcatctccaTCTTGGTCTTCATCTTCGCCATTGTCTCCTTGTCCATGTCAACTCTCACCATGCTCCACAACCAACCCTAAACACTTATCTTCAGACCATTCACAATTATTATCTTCATCGCACAAGAGAAGAGcgggaagaaagaaatttcaggAGACTCGGCATCCGGTGTACCGGGGTGTTCGGCAAAGAAATGGAGACAGATGGGTTTGTGAAGTCAGGGAACCAAACAAGAAGTCAAGGATATGGCTAGGCACTTACCCTAAGCCGGAAATGGCAGCTAGGGCACATGATGTAGCTGCAGTAGCACTTAGAGGCAGCTCAGCTATGCTTAATTTTCCTGACTCAGCCTTTCTTCTCCCTGTTGCAAGGTCATCTTCACCTAGAGATATAAGAGCTGCTGCAGCCAAAGCTGCTGAGGCTTTTAGACCAACcagttcttcttcttcttcctctgagGGCATTCGTGCGGTAGAGAGTGAAAAGGTTTTGGAGGGTTCAGTGGCAATAgatgatattaataaaatcatctcAGGGAAAAATCATAGTGGGAATGATCAGTTTACTTCAACACCATTTCTGGATGAGGAGGTTATGTTTAATGAGCTGGGGTTTTTGGATAGAATGGCAGAGGGTTTGTGTCTTACCCCACCGTCTATGGAAAGAGCATTGGATTGGGACGACATTGCTCGTGGCATGGACTTTTCTTTATGgacacaata 752 0.3989 MDFENIESSSSSPSWSSSSPLSPCPCQLSPCSTTNPKHLSSDHSQLLSSSHKRRAGRKKFQETRHPVYRGVRQRNGDRWVCEVREPNKKSRIWLGTYPKPEMAARAHDVAAVALRGSSAMLNFPDSAFLLPVARSSSPRDIRAAAAKAAEAFRPTSSSSSSSEGIRAVESEKVLEGSVAIDDINKIISGKNHSGNDQFTSTPFLDEEVMFNELGFLDRMAEGLCLTPPSMERALDWDDIARGMDFSLWTQ 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02292 250 ProSiteProfiles AP2/ERF domain profile. 67 124 IPR001471 GO:0003700|GO:0006355
Bva07g02292 250 Pfam AP2 domain 66 116 IPR001471 GO:0003700|GO:0006355
Bva07g02292 250 MobiDBLite consensus disorder prediction 1 46 - -
Bva07g02292 250 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 1 250 - -
Bva07g02292 250 CDD AP2 68 126 IPR001471 GO:0003700|GO:0006355
Bva07g02292 250 SMART rav1_2 67 130 IPR001471 GO:0003700|GO:0006355
Bva07g02292 250 Gene3D AP2/ERF domain 67 125 IPR036955 GO:0003700|GO:0006355
Bva07g02292 250 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 250 IPR045277 GO:0003700
Bva07g02292 250 PRINTS Ethylene responsive element binding protein signature 106 126 IPR001471 GO:0003700|GO:0006355
Bva07g02292 250 PRINTS Ethylene responsive element binding protein signature 68 79 IPR001471 GO:0003700|GO:0006355
Bva07g02292 250 SUPERFAMILY DNA-binding domain 67 126 IPR016177 GO:0003677
Bva07g02292 250 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02292 Bva-Chr7 18863455 18864207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02292 45 249 AP2-EREBP Transcription Factor Family AT5G51990 47.343 1.44e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva07g02292 AP2 4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02292 - - qsu:112024536 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00356 09 1891450 1892410 Bva07g02292 07 18863455 18864207 BWGD
Bva07g02292 07 18863455 18864207 Bva07g02292 07 18863455 18864207 ECH