Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02284 ATGTCTTCGCCAGGCAGCTCCCCTCTTACAAGAGCAATGAGGACACTGTACTGCGAAGGAGGgaactttattaatttacgATTATGCCACTGTTCTCAACTCCTCTCTCCAAAAGCGCCATTTCTTGTTTCATTCTCATTCCCGCAAATCCCACACATTTCGGTGAGAAACTCGACTCCTCCTTCCCTTTCCTGCAAAACCCGtctctcttctccttttgGACAGTTGATTAGAGCATCCATGGCCTCTTCTATCTCATCCACTGCCAAAGAGACAGAGACAAAACCATTCTCCGTGCTCTTTGTGTGCCTAGGAAACATCTGCAGAAGCCCAGCTGCTGAAGGTGTCTTCACGGACTTGGTCAAGAAAAGGGCTTTAGATTCCAAGTTTAAAATTGATTCTGCTGGCACTATCAATTACCATGAGGGGAATGAAGCTGACCCAAGAATGAGAGCAGCTTCTAAAGGGCGAGGGATTGCGATAACTTCTATTTCTAGGCCAATTCGGCCGTCTGATTTCAGAGACTTTGATCTTATTCTTGCTATggacaagaaaaatagagAGGACATATTGGAAGCTTTCAATAGATGGAAATTTAGAGATTCTTTACCAGATGATGCACATAAAAAGGTAAAATTGATGTGCTCATTTTGTAAGAAACATGATGAAACTGAAGTCCCAGATCCTTACTATGGTGGACCGCAAGGGTTTGAGAAGGTGTTAGATTTGCTTCAAGATGCTTGCGAATCACTTCTGGACAGTATCTTGGCTGAGAATAAACATATACAAGAATCTTA 797 0.4065 MSSPGSSPLTRAMRTLYCEGGNFINLRLCHCSQLLSPKAPFLVSFSFPQIPHISVRNSTPPSLSCKTRLSSPFGQLIRASMASSISSTAKETETKPFSVLFVCLGNICRSPAAEGVFTDLVKKRALDSKFKIDSAGTINYHEGNEADPRMRAASKGRGIAITSISRPIRPSDFRDFDLILAMDKKNREDILEAFNRWKFRDSLPDDAHKKVKLMCSFCKKHDETEVPDPYYGGPQGFEKVLDLLQDACESLLDSILAENKHIQES 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02284 265 Gene3D - 79 260 - -
Bva07g02284 265 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 68 260 - -
Bva07g02284 265 SUPERFAMILY Phosphotyrosine protein phosphatases I 95 255 IPR036196 -
Bva07g02284 265 CDD LMWPTP 98 253 - -
Bva07g02284 265 Pfam Low molecular weight phosphotyrosine protein phosphatase 99 252 IPR023485 -
Bva07g02284 265 SMART LMWPc_2 97 254 IPR023485 -
Bva07g02284 265 PRINTS LMW phosphotyrosine protein phosphatase signature 142 158 IPR017867 GO:0004725|GO:0006470
Bva07g02284 265 PRINTS LMW phosphotyrosine protein phosphatase signature 226 241 IPR017867 GO:0004725|GO:0006470
Bva07g02284 265 PRINTS LMW phosphotyrosine protein phosphatase signature 99 116 IPR017867 GO:0004725|GO:0006470
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02284 66 259 Protein tyrosine phosphatase (PTP) family AT3G44620 62.673 7.45e-91 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02284 K25307 - qsu:111996756 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02284 07 18827560 18829504 Bva07g02284 07 18827560 18829504 ECH