Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02281 ATGGAGGAACCTCAAAATGGTGGTAATGCTAACTCGGCTGTGGTAGAGACAAAGGAGGAGGCTGTGATTGGACCCGGTCCAGCCCCTCGGTCTCGACCAAAACGACCGATCCAGTTCGAGAAGGCCTACCTCGACGCTTTACCCTCCGCCAATATGTATGAGAAAAGTTATATGCATCGTGATGTTGTTACACATGTCGCTGTTTCAACTGCAGATTTTTTCATTACTGGAAGCATTGACGGTCATTTGAAGTTTTGGAAGAAAAGGCCTGTTGGAATCGAGTTTGCAAAACACTTCAGATCCCATCTTGGTCCGATTGAAGGCCTCGCCGTTAGTGTTGATGGTTTGCTTTGCTGTACAATATCAAACGACTGCTCGGTGAAGGTATATGATGTTGTCAACTTTGACATGATGGTCATGATTGGCTTGCCATATGTTCCTGGTGCTGTTGAGTGGGTTTACAAACAAGGGGACGTCAAAGCAAGGCTTGCCATTAGTGATAGAAACTCACCTTTTGTCCACATATATGATGCTCGATCTGGTTCAAATGAACCTATCATATCTAAAGAGATACATCTGGCTCCTGTTAAGGTTATGAAGTACAATCCTGCACATGATTCTGTAATCTCAGCTGATACAAAGGGGATAATTGAATACTGGAACCCCACTACACTTCAATTTCCAGAGGATGAGGCGAATTTTAAACTGAAAAGTGATACCAACCTTTTTGAAATCGTAAAATGCAAGACTTCAGTGTCAACTATTGAGATCAGCCCAGATGGCAAGCAATTTTCCATTACATCACCTGACCGTAGGATACGGGTATTTTGGTTCAAAACGGGTAAACTAAGGCGAGTTTATGATGAATCCCTGGAGGTTGCTCAGGATCTCCAAAGAAGTGATACTCCATTATACCGGCTGGAAGCCATTGATTTTGGCCGAAGAATGGCTgttgaaaaggaaatagagaAGACAGAAACGGCTCCACAACCAAATGCAGTTTTTGATGAAAgttctaattttcttatatatgcaACCTTGCTTGGGATAAAaATAGTGAATTTGCACACCAATAAAGTTGCTCGAATACTTGGAAAGGTGGAGAACAATGATAGGTTTCTAAGAGTTGCTTTATATCAAGGCGATCAAAGCagtaaaaaagtaagaaagatTCCTGCAGCAGCTGCAAATGTTAATGAAAGCAAGGATCCTTTGACTGATCCCACTCTCTTGTGTTGTGCTTTCAAAAAACACAGGATATATTTATTCAGTCGGAGAGAACCTGAAGAGCCTGAAGATGCAACTAAAGGAAGAGATGTATTCAATGAAAAGCCTCCTCCTGATGAACTCTTGGCAGTTTCAGATATTGGAAAGGCAGTTACAACATCACTTCCTGACAACGTTATTCTGCACACCACTATGGGTGACATTCACATGAGATTATATCCAGAGGAATGTCCAAAAACTGTGGAGAACTTCACAACTCACTGCCGGAATGGCTATTATGACAATCTTATATTTCATCGCGTCATCAAAGGCTTCATGATACAAACAGGAGATCCTTTGGGAGATGGTACCGGTGGGCAATCTATTTGGGGGAGAGAATTCGAGGATGAATTTCACAAAAGCTTGAGACATGATAGACCTTTCACGGTGTCAATGGCAAATGCGGGCCCAAATACAAATGGCTCTCAGTTCTTTATCACGACAGTGGCTACTCCTTGGCTGGACAACAAGCACACTGTATTTGGTAGAGTTGTGAAGGGAATGGATGTTGTGCAGATTATAGAAAAAGTGAAGACAGACAAGACCGACAAGCCATACCAAGACGTTAAAATTCTGAATGTTACTGTATCTGTAAAAGTTATAACAGGTTG 1877 0.4108 MEEPQNGGNANSAVVETKEEAVIGPGPAPRSRPKRPIQFEKAYLDALPSANMYEKSYMHRDVVTHVAVSTADFFITGSIDGHLKFWKKRPVGIEFAKHFRSHLGPIEGLAVSVDGLLCCTISNDCSVKVYDVVNFDMMVMIGLPYVPGAVEWVYKQGDVKARLAISDRNSPFVHIYDARSGSNEPIISKEIHLAPVKVMKYNPAHDSVISADTKGIIEYWNPTTLQFPEDEANFKLKSDTNLFEIVKCKTSVSTIEISPDGKQFSITSPDRRIRVFWFKTGKLRRVYDESLEVAQDLQRSDTPLYRLEAIDFGRRMAVEKEIEKTETAPQPNAVFDESSNFLIYATLLGIKIVNLHTNKVARILGKVENNDRFLRVALYQGDQSSKKVRKIPAAAANVNESKDPLTDPTLLCCAFKKHRIYLFSRREPEEPEDATKGRDVFNEKPPPDELLAVSDIGKAVTTSLPDNVILHTTMGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIFHRVIKGFMIQTGDPLGDGTGGQSIWGREFEDEFHKSLRHDRPFTVSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQIIEKVKTDKTDKPYQDVKILNVTVSVKVITG 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02281 625 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 468 618 IPR002130 GO:0000413|GO:0003755
Bva07g02281 625 PANTHER PEPTIDYLPROLYL ISOMERASE DOMAIN AND WD REPEAT-CONTAINING PROTEIN 1 12 619 - -
Bva07g02281 625 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 550 565 IPR002130 GO:0000413|GO:0003755
Bva07g02281 625 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 578 593 IPR002130 GO:0000413|GO:0003755
Bva07g02281 625 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 565 577 IPR002130 GO:0000413|GO:0003755
Bva07g02281 625 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 507 519 IPR002130 GO:0000413|GO:0003755
Bva07g02281 625 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 481 496 IPR002130 GO:0000413|GO:0003755
Bva07g02281 625 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 12 619 IPR044666 -
Bva07g02281 625 CDD cyclophilin_WD40 469 616 - -
Bva07g02281 625 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 464 618 IPR002130 GO:0000413|GO:0003755
Bva07g02281 625 Pfam WD domain, G-beta repeat 97 131 IPR001680 GO:0005515
Bva07g02281 625 SUPERFAMILY Tricorn protease domain 2 252 426 - -
Bva07g02281 625 Gene3D - 456 624 IPR029000 -
Bva07g02281 625 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 502 519 IPR020892 GO:0003755|GO:0006457
Bva07g02281 625 SUPERFAMILY WD40 repeat-like 61 284 IPR036322 GO:0005515
Bva07g02281 625 SMART WD40_4 238 277 IPR001680 GO:0005515
Bva07g02281 625 SMART WD40_4 92 131 IPR001680 GO:0005515
Bva07g02281 625 SMART WD40_4 50 87 IPR001680 GO:0005515
Bva07g02281 625 SMART WD40_4 182 221 IPR001680 GO:0005515
Bva07g02281 625 MobiDBLite consensus disorder prediction 1 34 - -
Bva07g02281 625 Gene3D - 46 436 IPR015943 GO:0005515
Bva07g02281 625 SUPERFAMILY Cyclophilin-like 465 618 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02281 Bva-Chr7 18806102 18811651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02281 468 620 U-box Gene Family AT5G67530 47.059 2.60e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02281 K12736 - qsu:111996721 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02281 07 18806102 18811651 Bva07g02281 07 18806102 18811651 ECH