Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02280 ATGAAGGTGATCGCAGCTTATTTGCTCGCCGTCTTGGGAGGGAACACATCTCCTACAGCCGATGATTTGAAGGATATCCTCGGTTCAGTTGGAGCTGAGGCTGACAATGAGAAAATTGAGTTGCTATTGTGTGAGGTCAGTGGCAAAGATATTACCGAGCTAATTGCTGCTGGAAGAGAGAAGTTGGCTTCAGTGCCTTGTGGTGGTGGGGCAGTTGCCGTAGCCCCAGCTGCTGGCGGTGCTCCTGCTGGTGGTGCAGCACCTGCTCCCGAAGcaaaggaggaaaagaaagtcgaagagaaagaagagtcCGATGACGACATGGGCTTCAGTTTATTCGACTA 344 0.468 MKVIAAYLLAVLGGNTSPTADDLKDILGSVGAEADNEKIELLLCEVSGKDITELIAAGREKLASVPCGGGAVAVAPAAGGAPAGGAAPAPEAKEEKKVEEKEESDDDMGFSLFD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02280 114 Pfam 60s Acidic ribosomal protein 17 113 - -
Bva07g02280 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Bva07g02280 114 MobiDBLite consensus disorder prediction 79 114 - -
Bva07g02280 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 2 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Bva07g02280 114 MobiDBLite consensus disorder prediction 90 104 - -
Bva07g02280 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Bva07g02280 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2A-LIKE 2 114 - -
Bva07g02280 114 Gene3D - 1 59 IPR038716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02280 Bva-Chr7 18804047 18805321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02280 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 69.298 9.96e-35 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02280 K02943 - oeu:111374818 139.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02280 07 18804047 18805321 Bva07g02280 07 18804047 18805321 ECH
Bva09g00367 09 1954784 1957099 Bva07g02280 07 18804047 18805321 ECH