Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02268 ATGGCGGAAGAACATCGATGCCAGGCTCCACAATTATGCGCAAACAACTGCGGTTTCTTTGGTAGCCCTGCAACGCAAAATCTATGTTCCAAATGCCACCGAGATTTGCAAATGAAGGAACAACAATCCTCTTCCGCGAAGCTGGTTCTCAACCAAACCCTAGCCCCCGCGTCGTCACCATCGTCATCGTCATCGCCAGAACCGGTAGCAGTTCTCGCCGTCCCTTCATCTTCTGTCGCAGCTGAACCGCCCCAGGCCGTGGAGGAGGCGAAAAGTACGTCGCCAGCGCAGCCGGAGCAGCAGCAGTCGAACAGGTGCATGACATGCAGGCGGCGCGTGGGATTGACTGGGTTCAAGTGTCGGTGCGGCTTGACTTTGTGCGGTTCCCACCGTTACCCGGAACAGCACGGTTGCGAGTTCGATTTCAAACGGATGGATAGGGAGCAGATCGCCAAGGCAAATCCTGTCGTCAAGGCGGAGAAGCTCGAGAAGGTCTA 497 0.5614 MAEEHRCQAPQLCANNCGFFGSPATQNLCSKCHRDLQMKEQQSSSAKLVLNQTLAPASSPSSSSSPEPVAVLAVPSSSVAAEPPQAVEEAKSTSPAQPEQQQSNRCMTCRRRVGLTGFKCRCGLTLCGSHRYPEQHGCEFDFKRMDREQIAKANPVVKAEKLEKV 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02268 165 ProSiteProfiles Zinc finger AN1-type profile. 100 146 IPR000058 GO:0008270
Bva07g02268 165 Pfam AN1-like Zinc finger 106 142 IPR000058 GO:0008270
Bva07g02268 165 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Bva07g02268 165 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Bva07g02268 165 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 165 - -
Bva07g02268 165 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 165 - -
Bva07g02268 165 SUPERFAMILY AN1-like Zinc finger 87 160 IPR035896 -
Bva07g02268 165 MobiDBLite consensus disorder prediction 43 71 - -
Bva07g02268 165 MobiDBLite consensus disorder prediction 43 103 - -
Bva07g02268 165 Gene3D - 78 161 IPR035896 -
Bva07g02268 165 SMART AN1_Zf_4 106 143 IPR000058 GO:0008270
Bva07g02268 165 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Bva07g02268 165 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 56 - -
Bva07g02268 165 Gene3D - 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02268 Bva-Chr7 18736584 18737081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02268 1 165 C2H2 Transcription Factor Family AT3G52800 52.941 1.37e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02268 - - mesc:110625469 216.853