Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02265 ATGGGTTTGAGGGATCAATGCAATttagaagacaaaaatatttaccttCATCCCCCAACTTTCATTGAATGGCTCGAGccatcttcttctccttcttcttcttcattatcATCATCTCATCATTCTCTGATGACTCAGCATGATCAGCTTGTAAAGGAGACTATCCAGTTTCTGCCCATTTTAAATGGGCTCACCCCAAAAGAGGAAGATATtggaataaaagaagagaaagtagaGCAAGTAACTGTGGCTTTGCACATTGGATTACCTAacatagaagaagaagatcatCATCCAACTGAGGCTGACGAGAAGAAGCTGGTTTTTGATGTTAAAGAGGAAGTAGAGGCCGTGAAGAAAAGCTTCCATGGCTGCTCTTTTAACCCAGAAAGAAGGTTTTGGATCCCAACTCCTGCACAGATCCTTGTTGGCCCGATGCAGTTTGCTTGCTCCATATGCAGCAAAACCTTCAATAGGTATAACAACATGCAgATGCATATGTGGGGGCATGGCTCCGAATATAGAAAAGGACCAGACTCGCTTAGAGGAACACAACCAGCAGCAATGCTGAGGCTACCATGCTATTGTTGTGCACAAGGCTGCAAAAACAACATCAACCATCCAAGAGCAAAACCGCTGAAGGATTTCAGAACCCTCCAAACCCACTACAAGAGAAAGCATGGGGCAAAACCCTTCATGTGCAGAAAATGTGGGAAAACATTTGCTGTGAAAGGAGATTGGAGGACTCATGAGAAGAACTGTGGCAAGTTATGGTACTGCACTTGTGGTTCAGATTTCAAACACAAAAGATCTCTCAAAGATCACATCAGATCTTTCGGAAACGGTCACTCCCCACATCCTTCTCTTGAAGGTTTTGAAGATGAGAAAGAATGCATCACTGGGTCTGAAGATGAAGTTGCTCACACATG 929 0.3972 MGLRDQCNLEDKNIYLHPPTFIEWLEPSSSPSSSSLSSSHHSLMTQHDQLVKETIQFLPILNGLTPKEEDIGIKEEKVEQVTVALHIGLPNIEEEDHHPTEADEKKLVFDVKEEVEAVKKSFHGCSFNPERRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEYRKGPDSLRGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCGKTFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGNGHSPHPSLEGFEDEKECITGSEDEVAHT 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02265 309 ProSitePatterns Zinc finger C2H2 type domain signature. 150 170 IPR013087 -
Bva07g02265 309 PANTHER ZINC FINGER PROTEIN WIP2 1 308 IPR043584 GO:0003700|GO:0010468
Bva07g02265 309 Pfam Zinc finger, C2H2 type 148 167 IPR013087 -
Bva07g02265 309 Gene3D Classic Zinc Finger 228 288 - -
Bva07g02265 309 ProSiteProfiles Zinc finger C2H2 type domain profile. 148 175 IPR013087 -
Bva07g02265 309 SMART c2h2final6 232 252 IPR013087 -
Bva07g02265 309 SMART c2h2final6 148 170 IPR013087 -
Bva07g02265 309 SMART c2h2final6 195 227 IPR013087 -
Bva07g02265 309 PANTHER ZINC FINGER PROTEIN WIP3-LIKE 1 308 - -
Bva07g02265 309 MobiDBLite consensus disorder prediction 279 309 - -
Bva07g02265 309 SUPERFAMILY beta-beta-alpha zinc fingers 218 252 IPR036236 -
Bva07g02265 309 Gene3D Classic Zinc Finger 147 170 - -
Bva07g02265 309 SUPERFAMILY beta-beta-alpha zinc fingers 139 171 IPR036236 -
Bva07g02265 309 MobiDBLite consensus disorder prediction 288 309 - -
Bva07g02265 309 ProSiteProfiles Zinc finger C2H2 type domain profile. 232 252 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02265 Bva-Chr7 18722455 18725208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02265 8 300 C2H2 Transcription Factor Family AT1G08290 57.396 1.57e-126 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva07g02265 zf-C2H2_6 0.00013 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02265 - - gmx:100819306 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00380 09 2041876 2044772 Bva07g02265 07 18722455 18725208 BWGD
Bva07g02265 07 18722455 18725208 Bva07g02265 07 18722455 18725208 ECH