Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02255 ATGTATCATCATCACCAACATCAAGGAAAGAACATCCATTCTTCTTCCAGAATGCCAATCCCATCTGAGAGGCATATGTTCCTTCAAGCCAGCAATGGATCCGGTGACTCAGGACTCGTACTCTCAACTGATGCTAAGCCTAGGCTGAAATGGACACCAGATCTTCATGCAAGGTTTATAGAAGCAGTCCATCAGTTAGGAGGAGCTGACAAGGCAACTCCAAAAACTGTAATGAAACTCATGGGGATTCCAGGGCTTACCTTATATCACCTCAAGAGTCATCTTCAGAAGTACAGATTGAGCAAGAATCTGCTTGGACAAAGTAATAATGTGACCCCCAAAATCAGCACAACAACAGGAGAAAGACTTTCTGAAACAAATGCAACTCATATGAACAATCTAAGCCTTGGGCCACAGTCTaacaaAGATATACATATAGGCGAGGCACTGCAAATGCAGATTGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAGAGACACCTGCAACTCCGCATTGAGGCTCAAGGAAAATACCTACAGGCGGTGCTAGAGAAAGCTCAGGAGACACTTGGTGGACAGAATTTGGGTGTAGTAGGACTTGAAGCTGCTAAAGTTCAACTTTCAGAGCTCGTGTCCAAAGTATCCTCTCAGTGCCtgaattcttcattttcagaGCTGAAGGAACTACCAGCATTCTGCCTCCAGCAAACACAAGCGAACCAGCCAACTGACTGCTCAATGGACAGTTGCCTCACATCATGCGAGGGAGCTCAAAAGGAGCAAGAGATACAAACTGGGGGAATGGGCTTAAGACCATTCAAAGGTCACACATTCATGGGACGAAAGGAAGCCATCGAAGCACCAATCCTTCGGAATTCTGAACTCAAGTGGCGTGATGAATTGAAAAGGAACACCTTCCTTACCCCTTTAGGCAATAatgcagaaagaagaaattatgcTGTAGATAGAAGTCCCAGCAACTTGTCTATGAGCATTGGACTTGAAGTAGAAACAGAGAATGGCAGCAACATGTATTCTGAAAGAATAATCTTGGGGAGGGAGGCAGATGGTGAATTCCGAGATGGAAACTCCCGGAAGGCAGAATCAATGAAATCAGTGGATGGAAAAATTTCTCAAGATTATAGATTGCCTTACTTTGCATCGTCAAGACTGGACCTAAATACCCGGGAAGAAAATGATGCTGCAACAAATTGTAAACAACTGGACTTGAATGGATTCAGTTGGAGCTG 1256 0.4307 MYHHHQHQGKNIHSSSRMPIPSERHMFLQASNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVHQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLLGQSNNVTPKISTTTGERLSETNATHMNNLSLGPQSNKDIHIGEALQMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGGQNLGVVGLEAAKVQLSELVSKVSSQCLNSSFSELKELPAFCLQQTQANQPTDCSMDSCLTSCEGAQKEQEIQTGGMGLRPFKGHTFMGRKEAIEAPILRNSELKWRDELKRNTFLTPLGNNAERRNYAVDRSPSNLSMSIGLEVETENGSNMYSERIILGREADGEFRDGNSRKAESMKSVDGKISQDYRLPYFASSRLDLNTREENDAATNCKQLDLNGFSWS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02255 418 Pfam MYB-CC type transfactor, LHEQLE motif 144 191 IPR025756 -
Bva07g02255 418 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Bva07g02255 418 Gene3D - 45 104 - -
Bva07g02255 418 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Bva07g02255 418 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Bva07g02255 418 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 4 418 IPR044848 GO:0003700
Bva07g02255 418 PANTHER MYB-RELATED PROTEIN 2 4 418 - -
Bva07g02255 418 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02255 Bva-Chr7 18655615 18658483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02255 78 418 G2-like Transcription Factor Family AT3G04030 52.035 8.67e-107 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva07g02255 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02255 - - gmx:100810396 645.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00389 09 2107485 2110070 Bva07g02255 07 18655615 18658483 BWGD