Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02220 ATGAACAAAGAAAGCAGAGAGGAGGGTTCGCAGTTTCAGAGGATGGACAGGGTTACGAGGGAAGCGCAGATGTCAATCGCGGCTTCTTCTATGTTTCCTGGCTTCAGGTTCTGTCCCACCGACGAAGAGTTGATTTCTTATTACCTTAGCAAGAAGTTAGATGGCCACGAAGAGAGTGTGCAAGTCATTCCCGAGGTTGAAATTTGTAGATATGAGCCTTGGGATTTACCAGCCAAATCATTCATTCAATCAGAAAACGAGTGGTTCTTCTTCTCCCCTCGTGGAAGAAAGTACCCAAATGGCTCACAGAGTAAGAGAGCAACTGAATGTGGTTATTGGAAGGCCACTGGAAAAGAGCGCAATGTAAAGTCAGGCTCTAATGTCATAGGTACCAAGCGGACTCTGGTATTCCACTTGGGTCGTGCACCAAAAGGGGAAAGAACCGAATGGATTATGCATGAGTACTGCATTAATGACAAAGCTCAGGATTCTTTGGTTGTTTGTCGCCTCAAGAGGAACACTGAGTTCCGTATGAATGATGCTCCAAATAGAGCCTCTTCAAGTCAAAGGCAAGCAGGAACTTCACATGAAAGTAACTGTGCTATCTCTTGTACTGGGACTGATCAATTGGGTGTCTCTGAGCAAGATAAAGGTGCTGCATGTAGCTCCAAACGGAGCAGCAGCAGTTATGGTTCCCTTTCAGTGGAGCAAATTGATTCTACCACTGAATCCAATCTCAGACCAAGTCCAACAAATGATCCTAACTTTACAGAATCTACCAGTCACCAAAAGGAGATGGATGAAGAGGATTTCTTTGCTGAGATACTGAAACACGATATAATCAAGCTAGACGAATCTTCACTGACGCAAGAGGCTAACACAAGATTACAGGATCCAGCGCAGATACATCCTTCCCAAGGCACAGCACAACGAAGAATAAGATTGAAGCTCGATAAACCAAGGCATTCTCCTGCAAGagtaatcaaatttgaaaaaccaAGCCATTCTGCTACACGAGTTCGTTTCCCATGCTCAAAGCACTCATTAAGCAGTAGCTACTTTACCATGTTAGTTTTGCTTGCGTTGTTCTTGGttgctttatttttgtctttattggGAGGTCTTAAACAAGTGAAAAGTTATGGGATATTTGGTTTCCaatgtaaattata 1172 0.4215 MNKESREEGSQFQRMDRVTREAQMSIAASSMFPGFRFCPTDEELISYYLSKKLDGHEESVQVIPEVEICRYEPWDLPAKSFIQSENEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCINDKAQDSLVVCRLKRNTEFRMNDAPNRASSSQRQAGTSHESNCAISCTGTDQLGVSEQDKGAACSSKRSSSSYGSLSVEQIDSTTESNLRPSPTNDPNFTESTSHQKEMDEEDFFAEILKHDIIKLDESSLTQEANTRLQDPAQIHPSQGTAQRRIRLKLDKPRHSPARVIKFEKPSHSATRVRFPCSKHSLSSSYFTMLVLLALFLVALFLSLLGGLKQVKSYGIFGFQCKL 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02220 390 MobiDBLite consensus disorder prediction 179 199 - -
Bva07g02220 390 MobiDBLite consensus disorder prediction 220 259 - -
Bva07g02220 390 SUPERFAMILY NAC domain 22 172 IPR036093 GO:0003677|GO:0006355
Bva07g02220 390 ProSiteProfiles NAC domain profile. 31 173 IPR003441 GO:0003677|GO:0006355
Bva07g02220 390 Gene3D NAC domain 40 178 IPR036093 GO:0003677|GO:0006355
Bva07g02220 390 Pfam No apical meristem (NAM) protein 33 156 IPR003441 GO:0003677|GO:0006355
Bva07g02220 390 MobiDBLite consensus disorder prediction 220 264 - -
Bva07g02220 390 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 25 365 - -
Bva07g02220 390 PANTHER NAC DOMAIN-CONTAINING PROTEIN 89 25 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02220 Bva-Chr7 18514063 18516151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02220 18 301 NAC Transcription Factor Family AT2G27300 50.704 8.05e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva07g02220 NAM 1.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02220 - - gsj:114373381 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02220 07 18514063 18516151 Bva07g02220 07 18514063 18516151 ECH