Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02215 ATGTCGGGTACGCGAGCTCCGACCACCTCGTCTCATCCGCCCGACCAGATCATGCACTCTATGAAACGCCAACTCCCATTTTCATCGATGAAGCCGCCCTTTGTAGCTCCGGGAGATTATCATCGCTTCACGCCTGACCATCGCCGAGCTGCTGAGCGAGAAGCCGAGGTTATCGTTGTTAAGTCTCCCCAATTGAAGCGGAAGAGTGATACAACTGATAACGAAGCTGATTCTGGTGATAGGATGGCTCCTAGGTCCACTGAAGCAGCTAATAGTCCATTTCAGACACCCATATCAGGAAAGATGGGGAAGGGAGGGAGAGGCTCAAGAATTACAAAATGCAACAGATCTGGACCTCAAACTCCAGGTTCCAATATAGGTTCTCCTTCTGCCAATAATCTCACTCCAGCTGGTCCATGCCGTTATGACAGCTCATTAGGTTTGTTGACGAAGAAGTTCATCAATTTGATCAAACAAGCGGAGGATGGCATTCTTGACCTGAATAAAGCCGCTGACACATTGGAgGTTCAAAAGAGGAGGATATATGACATAACAAATGTTCTCGAAGGGATTGGTCTTATAGAAAAGAAGCTTAAAAACAGAATTCAATGGAAGGGACTGGATGTTTCAAGGCCAGGGGAGGCTGATGATAATTTTGCTAGTTTACAGGCAGAAGTTGAAAATCTAACCATCGAGGAGCGCCGATTAGATGAACAAATAAGGGAGATGCAAGAAAGATTAAGGGAACTTAGTGAGGATGAAAACAATCAGaaGTGGCTTTTTGTTACTGAGGAAGATATTAAAGCTTTGCCCTGCTTCCAGAATGAAACGTTAATTGCAATTAAAGCCCCTCATGGTACCACTCTGGAAGTCCCTGATCCTGATGAGGCTGTTGATTATCCCCAAAGGAGATATAGGATAGTCCTGAGAAGCACAATGGGCCCGGTAGATGTTTATCTTGTTAGtcaatttgaagaaaagtttGAGGAGATTAATGGTGTTGAAGCAGCACCGGCACCTGCACCCGCACCCGCACCCAATCTTCCTTCCACTCCAGAGTACGAGAAGCATCCAGCAACAATGGCTACGGAGGTAAGAGGGAAGAACATAGAAGAGCAGGGACAAGACAGTCATAGAGCTTATTCAGATCTTAGTGCCTCTCAGGACTTCGTGACTGGGATCATGAAGATTGTTCCTTCAGATGTTGATAGCGATGCTGATTACTGGCTTTTATCTGATGCTGATGTTAGCATTACAGACATGTGGACAACAGAACCTGGAGTTGAATGGAATGAATTGGACACAATTCATGAAGATTATAGCATGACGAATGTAAGCACGCCGCGAGCCCAAACTCCTCCTTCTAACGCAAGTGAAGTGCCTTCGGCAGCTAAAACCACTGGAGGTTG 1409 0.4542 MSGTRAPTTSSHPPDQIMHSMKRQLPFSSMKPPFVAPGDYHRFTPDHRRAAEREAEVIVVKSPQLKRKSDTTDNEADSGDRMAPRSTEAANSPFQTPISGKMGKGGRGSRITKCNRSGPQTPGSNIGSPSANNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEADDNFASLQAEVENLTIEERRLDEQIREMQERLRELSEDENNQKWLFVTEEDIKALPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPVDVYLVSQFEEKFEEINGVEAAPAPAPAPAPNLPSTPEYEKHPATMATEVRGKNIEEQGQDSHRAYSDLSASQDFVTGIMKIVPSDVDSDADYWLLSDADVSITDMWTTEPGVEWNELDTIHEDYSMTNVSTPRAQTPPSNASEVPSAAKTTGG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02215 469 MobiDBLite consensus disorder prediction 1 136 - -
Bva07g02215 469 CDD E2F_DD 217 323 IPR032198 GO:0046983
Bva07g02215 469 MobiDBLite consensus disorder prediction 41 82 - -
Bva07g02215 469 Pfam E2F transcription factor CC-MB domain 222 322 IPR032198 GO:0046983
Bva07g02215 469 SUPERFAMILY E2F-DP heterodimerization region 219 323 IPR037241 -
Bva07g02215 469 Gene3D - 135 208 IPR036388 -
Bva07g02215 469 MobiDBLite consensus disorder prediction 444 469 - -
Bva07g02215 469 SUPERFAMILY "Winged helix" DNA-binding domain 141 204 IPR036390 -
Bva07g02215 469 SMART E2F_TDP_2 141 206 IPR003316 GO:0005667|GO:0006355
Bva07g02215 469 MobiDBLite consensus disorder prediction 113 136 - -
Bva07g02215 469 Pfam E2F/DP family winged-helix DNA-binding domain 143 206 IPR003316 GO:0005667|GO:0006355
Bva07g02215 469 Coils Coil 219 260 - -
Bva07g02215 469 PANTHER TRANSCRIPTION FACTOR E2FB 18 465 - -
Bva07g02215 469 MobiDBLite consensus disorder prediction 1 17 - -
Bva07g02215 469 Gene3D - 213 323 - -
Bva07g02215 469 PANTHER TRANSCRIPTION FACTOR E2F 18 465 IPR015633 GO:0000978|GO:0006357
Bva07g02215 469 Coils Coil 157 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02215 Bva-Chr7 18491623 18496363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02215 16 469 E2F-DP Transcription Factor Family AT5G22220 57.620 6.39e-166 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bva07g02215 E2F_CC-MB 1.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02215 K06620 - gmx:100819817 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02215 07 18491623 18496363 Bva07g02215 07 18491623 18496363 ECH