Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02212 ATGGAGTCTCGAATGGATCAGTATGAGATCATGGAGCAGATCGGTCGTGGAGCTTTTGGAGCAGCTATTCTTGTCCATCACAAGGCCGAGAAGAAAAAGTATGTGTTGAAGAAAATCAGGCTTGCGCGCCAGACTGAACGCTGCAGGAGATCTGCTCATCAAGAAATGGCTCTGATTGCCCGAATCCAACACCCTTACATTGTAGAATTCAAGGAAGCATGGGTTGAGAAGGGTTGCTATGTCTGCATTGTCACGGGCTATTGTGAAGGTGGTGACATGGCTGAATTgatgaaaaaatcaaatgggGTTTACTTTCCAGAGGAGAAACTCCTGAAGTGGGTTACCCAATTACTGTTGGCAGTTGAATACCTTCATTCCAATTTCGTTTTACATCGTGACCTGAAGTGTTCCAACATTTTTCTAACCAAAGATCAGGATGTTCGCCTTGGGGATTTTGGGCTTGCCAAGACTCTAAAAGCGGATGATTTGGCTTCTTCAGTCGTTGGAACTCCCAATTACATGTGTCCTGAACTGCTTGCAGATATTCCTTATGGATTCAAATCTGATATTTGGTCGCTagGGTGCTGTATATATGAGATGGCTGCTCATCGCCCTGCATTTAAAGCTTTTGATATGGCTGGATTGATAAGCAAGATAAATCGTTCCTCTATTGGCCCTTTGCCCTCCTGTTATTCCCCGTCCTTGAAAACACTGATCAAGGGTATGCTGAGAAAGAGCCCAGAGCATCGGCCAACAGCATCTGAGGTCTTAAAGCACCCTTATTTGCAACCTTATGTTGATCAGTATCGTCCATCTTTCAGTCCTCCAACAGCCTGTTCTCCTGAAAAGCCAATTTCTGCTGCCCATGTTTCTAGAAGGAGTATGGCTAAAAGTCAAAACAGTTGTAGTTCGAGTAGTGACAAAGATAGTTTAATGTCAAATGAGAGAAACGTGTCAATAGCGGTGCCAAACTGTGATAACAAAGGCACTGAAACAGATCTGGCATCtattgatgatgaagatgactCTGAGCATCTCCTGCCtagtgaagaagaaaatggctcCAGCACTGGCAGTGCTAAAGCAGACCGGCAAGAATTGATGAGACCATCTCATGTTGAACAGCAGCGGTCCAATGTTGAATCTAAGCCaccaaaaacaattaaaaatataatgatggCATTAAAAGAGGGAAAAGTTCGAGAAAATAATTCTCCAATGAGAGGCAATCGCATAAAGGTTGGTGGTGCACATTTGCAGAAAGCAAATACAGAAACATTGCCTAAATTACCCAAATCTATTGCTGTTGCTCCTGGCTCAAAGCCTAATTTAGAGTCAGCACCATCTGCACCTGCAAAAGCAACTCCTGAATCTGGAAAAAGAATACAGGGATTACATCCTTTAAAGCATCTGTTACCAGTGGTAGACTCCTCACCAAAAACTAAACCCAGAAATGATGGAACGTCCCCCTCTGGCCCTACTAAACAAGCAGAAGGAGATGGAGTTCCTCCCAAACAAAGGCTAAGGACACCTCCTAGCTTACTAAGAATACCTTCTTTTGCAGGACGATTGAGGCAGGTTGGGCTTGACGTTCCAAATGGAGCAAGTGATACAGGTTCAAATAAAATACCTCAGAAGCCTGAAAACAGTCCTTCTCAGTTGCCCAATGGTAATGTGCCACATGCTTTTAGAGAGCCTTCTGAAAGAGGTTCCAAGGGGGTGCAAACAGATAGCAGCAACTCTGTTTCATCTTCAGTTTCTATTCAAGGATTTGAGCTTTCTGACGATGCAACAACTTTTATTGATATGAGAGAACAAACTGAGAGTGTAACCCGCACTGAAAGTGTGGAACCACGTTCACACATTAGTTCAACTGCTACCTATCCCCACAGTCAGATGACCATAAATATGTCCAGGGAAACCTCTGAGACCACCCTGAATCTTCATGATACGATTCATGGTAATGAAAAAGTAGGCTCCAATTTAACTCCTCATTATACCCTTACAGATTCTAAGGAAACATTTCCTTCTGAAGTATGTTTTTCCATGAATCAAACCAGTATATCTGCTACCTGCGGTTGTTACAATACATCAGTAAGTCCCTCAGAGGAAGCGAATGAACAAGTCAAAGATCCTCAAGATACTGCTAAGAAGGTCACTTCAAGCGAGTCTCTTGAACTTCCACACACTAATTCTGGAGAAAAGTTTGTCTGTGAAGAGGTTGCTCCAGTAAGCAATCCCAATAATAGACCTGCTATAGTCAACCAGCCAAAACTTATGTGTGTTTCTGCTGGTGATGATAAATTCACAGTAAGGGAACGATTGTCTTCAGCGGCTGAAACTGCCCCTCCAATTAGTTCCACAAAAATATCAAGCCAGAAAGCTTTGCAAGAAGACAAAGGAGCCATTTTGCAGAACCCAGTGATGGAAAGGCCATCCACCGGCCATCTTCCTCCAGCTTTTGATGATGTCATCCACGTTATAAGGCATAGTAGTTTCCGTGTTGGGAGCGAACATCCAGTTAAGGAATCTATGGAGATGGGAGTTCAAAATGTGGATGTtggtaaatttattaatgtgGTAAGGGATGATTTAGAAATGAGAAACATGACCAATCCCGTTAGCCTTAAATCTTCTACTTGCTCTGACGCTATGAGCTTGAGGTCGAATATTTCTGAACATCTAGAAATGAGAAACTTGAGCTCTCCTCCAGCCGTTAAATCTTCAAGCTGTTCCGATGCTTTGAGcttgaattcaaatatttctGATCATTCCAGTGTTAAGGAAGCAGATATGAGAAATCCTGTTTCCCCAGTTTCAAAATGTGATTCCACTGAGTTGTCTAAACATAACCCTCCAATGACAGAAGAGGAAACACCAGCCAAGGAAACGTTGGATGTTAAATCTTTTAGGCAGAGAGCAGAGGCCCTCGAAGGGCTCTTAGAATTGTCTGCGGAGTTGCTGCAACAAAACAGATTGGAGGAACTCGCAATCATTCTAAAGCCCTTTGGTAAAGATAAGGTGTCCCCAAGGGAGACGGCCATTTGGTTAGCTAAGAGTCTAAAAGGAATGATGATTGAAGACAGTGCAGGACGGAGTTCATG 3104 0.4178 MESRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEMALIARIQHPYIVEFKEAWVEKGCYVCIVTGYCEGGDMAELMKKSNGVYFPEEKLLKWVTQLLLAVEYLHSNFVLHRDLKCSNIFLTKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCIYEMAAHRPAFKAFDMAGLISKINRSSIGPLPSCYSPSLKTLIKGMLRKSPEHRPTASEVLKHPYLQPYVDQYRPSFSPPTACSPEKPISAAHVSRRSMAKSQNSCSSSSDKDSLMSNERNVSIAVPNCDNKGTETDLASIDDEDDSEHLLPSEEENGSSTGSAKADRQELMRPSHVEQQRSNVESKPPKTIKNIMMALKEGKVRENNSPMRGNRIKVGGAHLQKANTETLPKLPKSIAVAPGSKPNLESAPSAPAKATPESGKRIQGLHPLKHLLPVVDSSPKTKPRNDGTSPSGPTKQAEGDGVPPKQRLRTPPSLLRIPSFAGRLRQVGLDVPNGASDTGSNKIPQKPENSPSQLPNGNVPHAFREPSERGSKGVQTDSSNSVSSSVSIQGFELSDDATTFIDMREQTESVTRTESVEPRSHISSTATYPHSQMTINMSRETSETTLNLHDTIHGNEKVGSNLTPHYTLTDSKETFPSEVCFSMNQTSISATCGCYNTSVSPSEEANEQVKDPQDTAKKVTSSESLELPHTNSGEKFVCEEVAPVSNPNNRPAIVNQPKLMCVSAGDDKFTVRERLSSAAETAPPISSTKISSQKALQEDKGAILQNPVMERPSTGHLPPAFDDVIHVIRHSSFRVGSEHPVKESMEMGVQNVDVGKFINVVRDDLEMRNMTNPVSLKSSTCSDAMSLRSNISEHLEMRNLSSPPAVKSSSCSDALSLNSNISDHSSVKEADMRNPVSPVSKCDSTELSKHNPPMTEEETPAKETLDVKSFRQRAEALEGLLELSAELLQQNRLEELAIILKPFGKDKVSPRETAIWLAKSLKGMMIEDSAGRSS 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02212 1034 MobiDBLite consensus disorder prediction 437 460 - -
Bva07g02212 1034 MobiDBLite consensus disorder prediction 473 513 - -
Bva07g02212 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Bva07g02212 1034 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 1017 - -
Bva07g02212 1034 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Bva07g02212 1034 MobiDBLite consensus disorder prediction 922 961 - -
Bva07g02212 1034 Gene3D Transferase(Phosphotransferase) domain 1 90 332 - -
Bva07g02212 1034 MobiDBLite consensus disorder prediction 273 385 - -
Bva07g02212 1034 MobiDBLite consensus disorder prediction 481 495 - -
Bva07g02212 1034 MobiDBLite consensus disorder prediction 292 331 - -
Bva07g02212 1034 CDD STKc_Nek 7 262 - -
Bva07g02212 1034 MobiDBLite consensus disorder prediction 572 587 - -
Bva07g02212 1034 Pfam Protein kinase domain 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02212 1034 SUPERFAMILY Protein kinase-like (PK-like) 4 314 IPR011009 -
Bva07g02212 1034 MobiDBLite consensus disorder prediction 533 557 - -
Bva07g02212 1034 ProSiteProfiles Protein kinase domain profile. 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02212 1034 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Bva07g02212 1034 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK5-LIKE 1 1017 - -
Bva07g02212 1034 SMART serkin_6 8 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02212 1034 MobiDBLite consensus disorder prediction 529 587 - -
Bva07g02212 1034 MobiDBLite consensus disorder prediction 699 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02212 Bva-Chr7 18475745 18481673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02212 12 341 MAP Kinase Kinase Kinase AT3G06030 30.618 7.91e-37 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bva07g02212 Pkinase 9.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02212 K08857 - gmx:100784761 1346.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00431 09 2285830 2291934 Bva07g02212 07 18475745 18481673 BWGD
Bva07g02212 07 18475745 18481673 Bva07g02212 07 18475745 18481673 ECH