Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02209 ATGGAAGGTCACTGGAAAAGTCTCTGCATTTTCCTCAGCTTTTGCCTGATGACATTGGGTTATGGTGCTACGGACCCTAACGATGCCAAAATTCTGAATGATTTCAGAAAGGGGTTGGAGAATCCAGAGGTTCTCCAATGGCCAGAAAATGATGACCCATGTGGGAATCCTCGATGGCCTTATGTCTTCTGCAATGGTGATAGAATTACTCAGATTCAGACCAAGAATCTCAGTCTTAAAGGAACATTACCTCCGAATTTTAACCAGCTCTCGGAACTTCAAAATTTGGGTCTTCAGCACAACAAGCTCAGGGGAAAGTTGCCCACTTTCAGTGGATTATCCAAATTGGAATTCGCATTCTTGGACGACAATGAATTTgattcaatcccacttgattTCTTCTGTGGACTTGGCAGCATTCGGTCCTTCGCTTTGGATAATAATCCGTTAAATGCGACTACTGGGTGGTCTCTTCCTGACGATTTAGGAAAGTCAGTACAATTGACGAATCTTTCTCTGATGGGCTGTAATTTGGTTGGTCCAGTGCCAGATTTTCTGAGCACATTGCCATCTCTGACGGCGCTGAAGCTTTCATACAACAGACTATCTGGTGGCATTCCAGCTAGTTTAGCTCAATCATCGTTGCAGATTTTGTGGCTGAATAATCAAAATGGTGGTGGCATGTCAGGTCCAATCGATGTGATTGCTTCAATGACTTTCCTAACACAGGTTTGGCTACATGGAAACCAATTCACAGGGACAATTCCTGAGACTATTGGAAATCTAACTTCCTTGAAGGAGCTCAATCTCAATAGCAATCAACTTGTTGGCTTGATTCCAGAAGCCTTGGCTAATATGGAGCTCGTGAAATTGGATTTAAATAATAACCGGTTCATGGGTCCTATACCAAAGTTCAAGGTTGCTGATGTTTCTTGTGATTCCAATTCCTTTTGTCAATCTAAGCCTGGGCTGCCATGTGCCCCTGAAGTTACTGCATTACTGGAATTTCTGGGTAAGTTGAATTACCCATCAATTCTCATTTCTGCATGGTCTGGTAATGAGCCATGTGCAAATACAGGACCATGGATGGGATTGAACTGCAATCCCAAGTCCGAGGTGTCTATAATCAATTTGGCAAGGCAGAAGCTCAATGGTACTCTGAGTCCCTCACTTGCTAAGTTAGGTTCACTCCTTGAAATTAGGCTTGGAGGGAATAATATAGGTGGCACGATTCCTACCAATTTCACCGAATTGAAATCTTTGAGATTGCTGGATTTAGGCTTCAACAATCTTGAGCCTCCATTACCAAACTTTCATGACAGTGTGAAGCTTATTACTGATGGTAATCCTCTTCTTTCTAATAAAACTGGAAGTAGTCCTCCACCTACGAGCAGCCCACCACCTTCACCTCCATCTACTAACAAGCCACATTCTCCAAGTCAGAATTCAAGCTCAAATCCTCAATCCCAATCAAATGACTCCAAAAGATTCAAAACAATAGCAATTGCGGTTGGAGTGGTAATCTTGTCAATTTTAGCTCTTCTAGTTATTTTCCTATTCATATGTTGCTCGAAGAAGAAGCGGAAATCCTCTTTTGATGCTCCTAGTTCCATTGTGGTTCACCCTCGAGACCCATCTGATCCAGATAATATGGTAAAAATTGCAGTTTCAAGTAAGACCACCGGAAGTTTATCAACACAGACCGGGACAAGTTCTTTGAGTAACAACAGTGGTGAAACAGATAACTGTCATGTAATTGAGGCTGGCAACCTTGTCATATCTGTTCAAGTTCTACGCAAGGTTACCAGGGATTTTTCTTCAGAAAATGAGCTAGGCCGTGGTGGGTTTGGTACTGTTTATAAGGGTGAACTGGAGGATGGAACGAAAATAGCTGTGAAGAGAATGGAGGGTGGGGCTATTACCAGTAAAGCGCTGGACGAATTTCAGGCTGAAATAACTGTTCTTTCTAAGGTCCGTCATAGACACTTGGTATCTCTGTTAGGGTATTCTATTGAAGGCAGTGAAAgacttttgatttatgaatatatGCATCTGGGTGCTCTAAGCAAACATCTTTTTCATTGGAAGAGCCTGAAATTGGAGCCTCTGTCTTGGTCACAAAGGCTCGCAATAGCACTAGATGTTGCTAGAGGTATGGAATACCTTCATGGTCTTGCCCGCCAGACCTTCATCCATCGAGACCTCAAGTCTTCTAATATTCTTCTGGGTGAGGATTTTCGAGCAAAAGTTTCAGACTTTGGTCTAGTCAAACTTGCCCCAGATGGTGAGAAGTCTGTAGTAACTAAGCTGGCTGGGACATTTGGATACCTGGCCCCTGAATATGCAGTGATGGGGAAAATCACTACTAAAGCTGATGTATTCAGCTACGGTGTGGTGTTGATGGAACTTCTGACTGGACTAATGGCACTCGATGAGAGCAGGTCTGAGGAAAGCCGATATTTGGCGGAATGGTTTTGGCgaattaaatcaaacaaagaaaaacttatgGCCGCCATTGATCCAGCTCTTGAGACTAGTGATGAGACATTCGAGAGTATTTCCATGATAGCTGATCTTGCTGGACATTGCACTGCAAGGGAGCCAAACCACCGCCCAGATATGGGTCATGCTGTTAATGTACTGTCTGCATTAGTAGAGAAGTGGAAACCAATTGATGACGAATTGGATTACTTCACTGGCATTGACTACGCTAGACCACTTCCCCAGATGCTCAAGATTTGGAAGGAAGCAGAAAGCAAAGAAGTGAGCTATACTAGCCTTGAAGACAGTAAAGGAAGCATACCGACCAGTTCTACTGGATTTGCAGGGTCCTTTACTTATCCTGATGCTCGATG 2855 0.4252 MEGHWKSLCIFLSFCLMTLGYGATDPNDAKILNDFRKGLENPEVLQWPENDDPCGNPRWPYVFCNGDRITQIQTKNLSLKGTLPPNFNQLSELQNLGLQHNKLRGKLPTFSGLSKLEFAFLDDNEFDSIPLDFFCGLGSIRSFALDNNPLNATTGWSLPDDLGKSVQLTNLSLMGCNLVGPVPDFLSTLPSLTALKLSYNRLSGGIPASLAQSSLQILWLNNQNGGGMSGPIDVIASMTFLTQVWLHGNQFTGTIPETIGNLTSLKELNLNSNQLVGLIPEALANMELVKLDLNNNRFMGPIPKFKVADVSCDSNSFCQSKPGLPCAPEVTALLEFLGKLNYPSILISAWSGNEPCANTGPWMGLNCNPKSEVSIINLARQKLNGTLSPSLAKLGSLLEIRLGGNNIGGTIPTNFTELKSLRLLDLGFNNLEPPLPNFHDSVKLITDGNPLLSNKTGSSPPPTSSPPPSPPSTNKPHSPSQNSSSNPQSQSNDSKRFKTIAIAVGVVILSILALLVIFLFICCSKKKRKSSFDAPSSIVVHPRDPSDPDNMVKIAVSSKTTGSLSTQTGTSSLSNNSGETDNCHVIEAGNLVISVQVLRKVTRDFSSENELGRGGFGTVYKGELEDGTKIAVKRMEGGAITSKALDEFQAEITVLSKVRHRHLVSLLGYSIEGSERLLIYEYMHLGALSKHLFHWKSLKLEPLSWSQRLAIALDVARGMEYLHGLARQTFIHRDLKSSNILLGEDFRAKVSDFGLVKLAPDGEKSVVTKLAGTFGYLAPEYAVMGKITTKADVFSYGVVLMELLTGLMALDESRSEESRYLAEWFWRIKSNKEKLMAAIDPALETSDETFESISMIADLAGHCTAREPNHRPDMGHAVNVLSALVEKWKPIDDELDYFTGIDYARPLPQMLKIWKEAESKEVSYTSLEDSKGSIPTSSTGFAGSFTYPDAR 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02209 951 SMART serkin_6 605 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02209 951 PANTHER OSJNBA0070M12.3 PROTEIN 7 951 - -
Bva07g02209 951 MobiDBLite consensus disorder prediction 460 475 - -
Bva07g02209 951 MobiDBLite consensus disorder prediction 558 577 - -
Bva07g02209 951 Pfam Leucine rich repeat N-terminal domain 328 368 IPR013210 -
Bva07g02209 951 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Bva07g02209 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Bva07g02209 951 ProSitePatterns Protein kinases ATP-binding region signature. 611 633 IPR017441 GO:0005524
Bva07g02209 951 Pfam Protein tyrosine and serine/threonine kinase 608 879 IPR001245 GO:0004672|GO:0006468
Bva07g02209 951 ProSiteProfiles Protein kinase domain profile. 605 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02209 951 Gene3D Ribonuclease Inhibitor 328 456 IPR032675 -
Bva07g02209 951 MobiDBLite consensus disorder prediction 449 493 - -
Bva07g02209 951 PANTHER OSJNBA0070M12.3 PROTEIN 7 951 - -
Bva07g02209 951 Pfam Leucine rich repeat 241 298 IPR001611 GO:0005515
Bva07g02209 951 Gene3D Ribonuclease Inhibitor 25 324 IPR032675 -
Bva07g02209 951 Gene3D Transferase(Phosphotransferase) domain 1 683 897 - -
Bva07g02209 951 SUPERFAMILY Protein kinase-like (PK-like) 584 881 IPR011009 -
Bva07g02209 951 SMART LRR_typ_2 418 440 IPR003591 -
Bva07g02209 951 SMART LRR_typ_2 90 112 IPR003591 -
Bva07g02209 951 SMART LRR_typ_2 262 285 IPR003591 -
Bva07g02209 951 SMART LRR_typ_2 394 417 IPR003591 -
Bva07g02209 951 SMART LRR_typ_2 137 165 IPR003591 -
Bva07g02209 951 SMART LRR_typ_2 189 213 IPR003591 -
Bva07g02209 951 SMART LRR_typ_2 113 136 IPR003591 -
Bva07g02209 951 SUPERFAMILY L domain-like 24 304 - -
Bva07g02209 951 MobiDBLite consensus disorder prediction 476 493 - -
Bva07g02209 951 Gene3D Phosphorylase Kinase; domain 1 566 682 - -
Bva07g02209 951 CDD STKc_IRAK 611 881 - -
Bva07g02209 951 SUPERFAMILY L domain-like 328 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02209 Bva-Chr7 18461680 18464043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02209 78 899 Receptor kinase-like Gene Family AT1G55610 30.769 2.04e-87 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bva07g02209 PK_Tyr_Ser-Thr 9.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02209 - - gmx:100785090 1342.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02209 07 18461680 18464043 Bva07g02209 07 18461680 18464043 ECH