Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02202 ATGGCGACGTACTTTCATGGCAATAACTCAGAAATCCAATCCTCTGGTGATGGCTTACAGACACTTTACCTTATGAATCCCAGCTACGTACCCTATTCTGACACTGCGGCTCAGCATCAGCACCAGACAACGCCCAACATGCTCCTTGTTAATCCCAACACTCCCGGCAACGCGCTCAACCTCGCCAACTTCTCCCACGCGCCACCACACTCGCCCAACCAACAACACCTTATTGGCGTTACCTTTCCCACAAACATCATCGGTTCCACTTCCAACAACTCGGAAGATCCCACTCGACCCTCCTTGATTGCCCATGCCGGCCACCATGAAATCTCAGGTTTCCATGGCTTCCCAACCTCCTCGGCGCCACGTGTCCACTACAACTTGTGGGGTTCAATGATTGATCAAACGGCGTCGGGGGCAGCTTCCGCGTCTACCAGTTCTGGCGGTGCCACTACAGGAGATGTCTCGCCGCAGATGGGTTTCCGGAGGCCCAGTCAGCAGGGATTGTCACTCAGCCTTTCTTCGCAACAAACAGCTTACAGGTCACTTTCCGGCGAGCTCGACGTGCCGGGACATGCCCAGGTTCTAGCTATCTCGCCATCTAGTCGTGGCGGTGGCGGCGGCGATGATATGAGGATTCTTGGTAATTCTCCTTCGTCGGTGTCCAATGGGATTTCTAGTATGCAGAGTGTTATTTTCGGGTCTAAGTATTTGAAGGCTGCACAAGAGCTTCTGGATGAAGTTGTTAATGTGGGCAAAGGAATCAGTAAAGCTGATTTAATGGAGTGCGCTAttaaagagaagatgaaagcGAATAAAGAGTCAAGTTCTGGAATTGGTGAAGGTTCAAGTGGTGGAGGAGATCAAAATAATGGCAAGCAAGGAGCTGAGCTTAGCACTGCTCAAAGACAAGAGCTTCAGCTGAAAAAATCCAAGCTTGTTAGCATGCTTGATGAGGTGGAGCAAAGGTACAGACAGTATCATCACCAGATGCAAGTAGTGATATCTTCATTTGAGCAGGCAGCGGGTTTTGGCACAGCAAAATCATACACATCGCTTGCCCTAAAGACTATCTCAAAGCAATTTCGATGTCTTAAAGATGCAATCTCTTCACAAATCAGAGCCACAAGCAAGAACTTAGGTGAAGAAGATTGCCTGGGAGCTAAGGTAGAAGGCTCAAGACTTAGGTATGTTGATCATCACCTCCGGCAGCAACGGGCACTACAGCAGCTGGGAATGATTCAGCACAATGCTTGGAGGCCCCAAAGAGGATTGCCCGAACGAGCTGTTTCCATTCTTCGTGCTTGGCTTTTTGAGCATTTCCTTCACCCCTATCCTAAGGACTCTGATAAAGTTATGCTCGCAAAACAAGCTGGACTTACTCGAAGCCAGGTGTCTAACTGGTTCATAAACGCGCGAGTTCGGCTATGGAAACCAATGGTTGAAGAAATGTACATGGAAGAAATTAAGGAACAAGAGCAGAATGGCTCTCAGGACAACAATTCAAAAGAATCAAACAAGGAGTTGGGTTCATCAACAAATGCTCCTCCTGAGGAATCTGGAAGTGCCATTAGACTTGATCGGATTAAAGCCTTCCGATCAAAACCAGAAAGCAgcttcaacaacaacaaaaacgCTTCTACAACTGATatctcaaattcttcaatGGGAGGATCCCTTCAATCGCAGACAGGTTTTCATCTTGCAGGATCATCTGACATGCAAAGAAGTCCAAACAAGCCAAGAAATTCCGAGTtacaaaattctccaaataaGATTCTCTCAATGGACATGGAAATGAAACCCGGGGAAACAAACAGATCAGAAGTCACCACAAACTTTGGCATTGAAAGGCAAAGAAAGGATGGTTACCCTATAATAACTGGCAATGCAAACCAACAAGGAGGTAGTTATGGAGCATTTTCCATGGAAGATATTGGAAGGTTTAACGTCTCTGAGcaattagctccaaggtttcATGGGAATGGTGTTTCACTGACTCTGGGACTTCCCCACAGTGAGAACCTTCCCCTCTCAGGAACCCAACATGGATTTCTCTCTCCAAATATTCATTTGGGAAGGAGGCTTGAGATGGGATCCAATGGAACTGAGTTTTGTGCAATCAACAGTAACCCACCATCTTCTCATTCGGGCACTGGTTATGAGAATATTAATGACATTCAAAACGGAAAGAGGTTTGCTGCTCAATTACTGCCAGATTTCGTCACCTG 2234 0.4534 MATYFHGNNSEIQSSGDGLQTLYLMNPSYVPYSDTAAQHQHQTTPNMLLVNPNTPGNALNLANFSHAPPHSPNQQHLIGVTFPTNIIGSTSNNSEDPTRPSLIAHAGHHEISGFHGFPTSSAPRVHYNLWGSMIDQTASGAASASTSSGGATTGDVSPQMGFRRPSQQGLSLSLSSQQTAYRSLSGELDVPGHAQVLAISPSSRGGGGGDDMRILGNSPSSVSNGISSMQSVIFGSKYLKAAQELLDEVVNVGKGISKADLMECAIKEKMKANKESSSGIGEGSSGGGDQNNGKQGAELSTAQRQELQLKKSKLVSMLDEVEQRYRQYHHQMQVVISSFEQAAGFGTAKSYTSLALKTISKQFRCLKDAISSQIRATSKNLGEEDCLGAKVEGSRLRYVDHHLRQQRALQQLGMIQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQAGLTRSQVSNWFINARVRLWKPMVEEMYMEEIKEQEQNGSQDNNSKESNKELGSSTNAPPEESGSAIRLDRIKAFRSKPESSFNNNKNASTTDISNSSMGGSLQSQTGFHLAGSSDMQRSPNKPRNSELQNSPNKILSMDMEMKPGETNRSEVTTNFGIERQRKDGYPIITGNANQQGGSYGAFSMEDIGRFNVSEQLAPRFHGNGVSLTLGLPHSENLPLSGTQHGFLSPNIHLGRRLEMGSNGTEFCAINSNPPSSHSGTGYENINDIQNGKRFAAQLLPDFVT 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02202 744 SMART prehox3 227 372 IPR006563 -
Bva07g02202 744 Gene3D - 423 502 - -
Bva07g02202 744 MobiDBLite consensus disorder prediction 491 594 - -
Bva07g02202 744 MobiDBLite consensus disorder prediction 198 219 - -
Bva07g02202 744 MobiDBLite consensus disorder prediction 277 300 - -
Bva07g02202 744 SUPERFAMILY Homeodomain-like 421 487 IPR009057 -
Bva07g02202 744 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 7 691 - -
Bva07g02202 744 SMART HOX_1 420 484 IPR001356 GO:0003677
Bva07g02202 744 MobiDBLite consensus disorder prediction 536 594 - -
Bva07g02202 744 ProSiteProfiles 'Homeobox' domain profile. 417 480 IPR001356 GO:0003677
Bva07g02202 744 MobiDBLite consensus disorder prediction 141 169 - -
Bva07g02202 744 Pfam Homeobox KN domain 437 476 IPR008422 GO:0003677|GO:0006355
Bva07g02202 744 Pfam Associated with HOX 232 371 IPR006563 -
Bva07g02202 744 MobiDBLite consensus disorder prediction 272 300 - -
Bva07g02202 744 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 691 - -
Bva07g02202 744 MobiDBLite consensus disorder prediction 496 520 - -
Bva07g02202 744 CDD homeodomain 420 481 IPR001356 GO:0003677
Bva07g02202 744 Coils Coil 304 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02202 Bva-Chr7 18408593 18413010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02202 1 743 Homeobox Transcription Factor Family AT2G35940 44.880 1.88e-148 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bva07g02202 POX 1.3e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02202 - - gmx:100779075 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00442 09 2350245 2354623 Bva07g02202 07 18408593 18413010 BWGD
Bva07g02202 07 18408593 18413010 Bva07g02202 07 18408593 18413010 ECH