Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02199 ATGGATGAAATTGAAGTTCCTCCCCATTTTCTCTGTCCCATTTCCCTACAACTTATGAGAGACCCTGTTACAGTCTCTACAGGAATCACTTACGATAGAGAAAATATAGAGACATGGTTGTTTTCATGCAAGAACAGCAGTTGCCCTGTCACTAAGCAATCACTCTCAGACACAGATCTTACCCCAAACCACGTTCTGCGCCGTTTGATCCAAGCATGGTGCACCCTTAATGCCTCCCATGGCATTGAACGCATTCCAACTCCAAAGCCACCCATTGAGAAAACCCAGATTGTCAGAATCCTCTCTGAAGCAAAAAGGTTTCCGGATAAGCAGCTTCAATGCCTCAGAAGACTTCGATCTATTGTTTTCGAAAGCCAAAGGAACAAGAGCTGTTTGGAATCAGCAGGGGCGATAGAATTCTTGGCTTCatgtttgaagaagaaaagcgAAGAAGACTCAACTCTGCAGATTGAAGCAGAAGCTGCTATTGAAGTCTTATTTCATCTAAATCCTTCTGaagttcatttaaaaaatctaatgaaCAACGAGGGCATTCAATTAGTTGAGTCTTCTATTCGAATCTTGAAACTTGGGAACTATCAATCTCGAGCTTATGCGACTATGTTATTGAAGTCCGGATTTGAAGTAGCCGATCCTATCCAATTGATCAATGTCAGAACGCAACTGTTTGTGGAAATAACGAAAGTGCTACGAGACCAGATTTCGCATCAGGCTTCAAAGGCTGCATTGAAGCTTCTAGTGGAGCTATGTCCATGGGGGAGAAACCGAATCAAAGCCGTTGAAGGCGGTGCCGTCTTGAGGCTGATAGAGCTCCTTCTGGATTCCTCTGAAAGAAGAGCATGTGAGCTGGTGCTAATTGCTTTGGATCAACTTTGTGGTTGTGCAGAAGGGAGAGCAGAGTTGTTGAAGCATGGAGCGGGAGTGGCCATAGTGTCCAAGAAAATTCTAAGGGTTTCTCATGTGGGAAGTGATAGAGCGATTAGAATATTGAGCTCCATTTGTAGGTATTCAGCCACAAGTAGAGTGCTTCAAGAAATGTTGCTACTTGGGGCAGTGTCCAAATTGTGTTTGGTGCTTCAGGTGGATGGAAATTGCAAGACAAAGGAGAGAGCCAAGGAGATGCTCAAATTGCATTCTAGAGTATGGAAGAATTCTCCATGTATTCCTCTTCCTTTGCTCTCTTCCTATCCATCTAATTA 1220 0.4246 MDEIEVPPHFLCPISLQLMRDPVTVSTGITYDRENIETWLFSCKNSSCPVTKQSLSDTDLTPNHVLRRLIQAWCTLNASHGIERIPTPKPPIEKTQIVRILSEAKRFPDKQLQCLRRLRSIVFESQRNKSCLESAGAIEFLASCLKKKSEEDSTLQIEAEAAIEVLFHLNPSEVHLKNLMNNEGIQLVESSIRILKLGNYQSRAYATMLLKSGFEVADPIQLINVRTQLFVEITKVLRDQISHQASKAALKLLVELCPWGRNRIKAVEGGAVLRLIELLLDSSERRACELVLIALDQLCGCAEGRAELLKHGAGVAIVSKKILRVSHVGSDRAIRILSSICRYSATSRVLQEMLLLGAVSKLCLVLQVDGNCKTKERAKEMLKLHSRVWKNSPCIPLPLLSSYPSN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02199 406 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 84 IPR013083 -
Bva07g02199 406 PANTHER WDSAM1 PROTEIN 1 404 IPR045185 GO:0061630
Bva07g02199 406 PANTHER OS11G0573500 PROTEIN 1 404 - -
Bva07g02199 406 Pfam U-box domain 6 75 IPR003613 GO:0004842|GO:0016567
Bva07g02199 406 SUPERFAMILY RING/U-box 3 80 - -
Bva07g02199 406 ProSiteProfiles U-box domain profile. 5 80 IPR003613 GO:0004842|GO:0016567
Bva07g02199 406 Gene3D - 90 391 IPR011989 -
Bva07g02199 406 SUPERFAMILY ARM repeat 107 382 IPR016024 -
Bva07g02199 406 CDD RING-Ubox_PUB 10 53 IPR045210 -
Bva07g02199 406 SMART Ubox_2 9 73 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02199 Bva-Chr7 18395019 18396239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02199 2 404 U-box Gene Family AT2G35930 55.283 1.63e-163 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02199 - - gmx:100778012 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00446 09 2368941 2370158 Bva07g02199 07 18395019 18396239 BWGD
Bva07g02199 07 18395019 18396239 Bva07g02199 07 18395019 18396239 ECH