Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02189 ATGTTTGGGAGGGCACCCAAGAAAAGTGACAACACAAGGTATTATGATATTCTGGGGGTATCGAAAAACGCTTCTCAGGACGATTTGAAGAAGGCTTACAAGAAAGCCGCCATCAAGAATCATCCCGACAAGGGCGGCGACCCGGAGaagTTTAAAGAGCTTGCCCAAGCTTACGAGGTTCTGAGTGACCCTGAGAAACGTGAGATATATGATCAATATGGTGAAGATGCACTTAAGGAAGGAATGGGTGGTGGCGGTGGTGGCCATGACccatttgatattttcagTTCTTTCTTCGGCGGAAGCCCATTTGGAGGTGGCAGTAGTAGAGGGCGTAGGCAGAGGCGGGGTGAAGATGTGGTTCACCCCCTGAAGGTCTCTTTGGAAGACCTTTACCTTGGTACATCTAAGAAGCTTTCCCTCTCACGGAATGTGATATGCTCCAAGTGCAGTGGCAAGGGATCAAAATCCGGGGCTTCCATGAAGTGCGCTGGTTGTCAAGGAACTGGTATGAAGGTTTCTATTAGGCACCTTGGTCCCTCTATGATTCAACAAATGCAACATCCTTGCAATGAATGTAAGGGAACTGGAGAAACTATCAATGAAAGAGATCAATGCCCACAGTGTAAGGGGCAGAAGGTTGTCCAAGAGAAGAAAGTGCTTGAGGTTATTGTGGAGAAGGGTATGCAGAATGCACAGAAGATTACATTCCCTGGCGAAGCAGATGAAGCGCCGGATACAATTACAGGGGATATAGTCTTTGTCCTTCAGCAGAGGGAGCATCCCAAGTTcaagagaaaaggagaagacCTCTTTGTGGAGCATACTCTGTCCCTCACCGAGGCTTTATGTGGCTTCCAATTTGTGCTGACTCACTTGGACGGCAGGCAGCTCCTTATCAAGTCAAACCCTGGGGAAGTTGTCAAGCCTGATTCATACAAGGCCATCAATGATGAGGGCATGCCAATGTATCAGAGGCCATTTATGAAGGGAAAGCTCTATATTCACTTCACTGTGGACTTCCCTGATTCCCTGAGTCTTGAGCAGGTCAAGGCTTTGGAGGCTGTTCTGCTGCCTAAGCCTTCATCACAGTTGACAGATATGGAGCTGGATGAGTGTGAGGAGACTACACTTCATGATGTTAATATTGAGGAGGAGTTGAGGAGGAAACAAGCTCAGGAGGCCTATGAGGAGGATGAAGACATGCATGGGGGTGCTCAGAGAGTACAGTGTGCTCAGCAGTA 1244 0.4686 MFGRAPKKSDNTRYYDILGVSKNASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGSPFGGGSSRGRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVICSKCSGKGSKSGASMKCAGCQGTGMKVSIRHLGPSMIQQMQHPCNECKGTGETINERDQCPQCKGQKVVQEKKVLEVIVEKGMQNAQKITFPGEADEAPDTITGDIVFVLQQREHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDSYKAINDEGMPMYQRPFMKGKLYIHFTVDFPDSLSLEQVKALEAVLLPKPSSQLTDMELDECEETTLHDVNIEEELRRKQAQEAYEEDEDMHGGAQRVQCAQQ 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02189 414 CDD DnaJ_C 118 345 - -
Bva07g02189 414 MobiDBLite consensus disorder prediction 391 405 - -
Bva07g02189 414 CDD DnaJ 14 63 IPR001623 -
Bva07g02189 414 Hamap Chaperone protein DnaJ [dnaJ]. 10 390 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bva07g02189 414 SUPERFAMILY HSP40/DnaJ peptide-binding domain 264 353 IPR008971 GO:0006457|GO:0051082
Bva07g02189 414 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 144 216 IPR036410 -
Bva07g02189 414 SUPERFAMILY HSP40/DnaJ peptide-binding domain 118 262 IPR008971 GO:0006457|GO:0051082
Bva07g02189 414 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Bva07g02189 414 SUPERFAMILY Chaperone J-domain 8 107 IPR036869 -
Bva07g02189 414 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Bva07g02189 414 PANTHER CHAPERONE PROTEIN DNAJ 2-RELATED 6 414 - -
Bva07g02189 414 PRINTS DnaJ domain signature 66 85 IPR001623 -
Bva07g02189 414 PRINTS DnaJ domain signature 15 33 IPR001623 -
Bva07g02189 414 PRINTS DnaJ domain signature 46 66 IPR001623 -
Bva07g02189 414 Gene3D - 147 213 - -
Bva07g02189 414 Pfam DnaJ central domain 147 213 IPR001305 GO:0031072|GO:0051082
Bva07g02189 414 Gene3D - 262 343 - -
Bva07g02189 414 MobiDBLite consensus disorder prediction 391 414 - -
Bva07g02189 414 CDD DnaJ_zf 147 213 IPR001305 GO:0031072|GO:0051082
Bva07g02189 414 Pfam DnaJ domain 14 71 IPR001623 -
Bva07g02189 414 Gene3D DnaJ domain 10 109 IPR036869 -
Bva07g02189 414 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 6 414 IPR044713 GO:0006457|GO:0030544
Bva07g02189 414 Gene3D - 110 261 - -
Bva07g02189 414 ProSiteProfiles Zinc finger CR-type profile. 134 218 IPR001305 GO:0031072|GO:0051082
Bva07g02189 414 SMART dnaj_3 12 66 IPR001623 -
Bva07g02189 414 Pfam DnaJ C terminal domain 121 342 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02189 Bva-Chr7 18315348 18317821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02189 14 73 C2H2 Transcription Factor Family AT1G74250 42.029 3.71e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02189 K09503 - gmx:547558 716.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00455 09 2430789 2433265 Bva07g02189 07 18315348 18317821 BWGD
Bva07g02189 07 18315348 18317821 Bva07g02189 07 18315348 18317821 ECH
Bva09g00455 09 2430789 2433265 Bva07g02189 07 18315348 18317821 ECH