Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02182 ATGAATGGCATTGATGTGTTTTCGGTGAAGCCAATGCTTCATAGTGCCAAACGGGGCCTAATTCGAATTTGGTGCTTTTTACGTCAGTCTGGTACGATACCGAGAAACGAGAACCCGCTCAAACTTGAAGGTTTTCTTGCCCCTGCGTCCAAAATGTCTGATATAAGGAAATGGTTTATGAAATCCCACGACAAGGGCAATGCGGGTGAGTCCAAGCCTACAAATCAGACGAAGCCTTCTACAGCTAAATCACAGCCGGAAAAACCAGCACCTGGAGGTCAAGAAAGTTCAGGGAGGAGGAAAACAagcaaatattttgataaggACAAACAAAAGCCACAAGATGAGGTAGAAACTAAGGGTCTTCCAGCTAAAAGAAAGAATCCAAAGGAGAGTGAGGAACTACTAAAGCCCCctccttcaaaaaaaattcatgaagcTGATAAAGATGATGGAGACAACTCTATCTTGCCCACATCCACAAAGAAGTCAGCTGACAACACTCctataaagaaagcaaagagtGGATCAGGTAGGGGAATTCCGCAGAAATCTCTAGAACTAGAAGAAAGTGATGAAGATGATAACAAAGATTCTGTATCACCCCTTAAATCTGCTGGAAGGGGTCGTGGTGGAAAAGGTGCATCAGCACAATCAACTGGGGGGCGGGGTAGAGGGGGAGGAAGGGGtggatttatgaattttggagaaagaaaagatccACCTCACAAAGGAGAAAAGGAAGTCCCTGAAGGTGCTTCTGATTGTTTAGCTGGTTTAACTTTTGTAATCAGTGGAACGCTGGACAGTTTGGAACgagaagaagcagaagatTTAATTAAACGCCATGGTGGTCGTGTGACTGGATCAGTCAGCAAGAAAACGAATTATCTTTTATGTGATGAAGATATTGGGGGCAGGAAATCTGCCAAAGCCAAAGAGTTGGGAACTGCCTTCCTCACTGAGGATGGCTTGTTTGATATGATCCGTTCATCAAAACCTGCATCCAAAGTTGCTAAAGCTCCttcacaaaaagaaacaaagcaatTGGTGAATGAGGTTGTCGCATCCCAGCCAAAAAGTCAGCAAAAAGCACAAGCCAAGGCAAATGCAGTATCCCAACTTTCAGGCTCAGCTTCTGCCCCAGCTAAGCCTAAGAAACAAAGTTCTGTACAGTCTTCTTTCATATGGACAGAGAAGTATCGACCTAAAGTTCCAAATGACATCATAGGGAATCAGTCACTTGTTAAACAACTTCATGATTGGTTGACACATTGGCATGAGCAGTTTCTTGACAGCGGGaacaaaaaaaaggggaaaaaacaaaatgattctGGTTCAAAAAAGGCAGTCTTATTGAGTGGAACTCCTGGTATAGGAAAAACCACAGCAGCAAAGTTGGTCAGTCAGATGCTTGGTTTCCAAGCCATAGAGgTAAACGCTAGTGACAGCCGTGGGAAGGCTGATAGCAAAATTGAGAAAGGAATTGGCGGAAGCAATGCAAATTCTATTAAGGAACTTGTCACTAATGAGGCCTTGGGTGCTAACATGGATCGGTCAAAGCTTTCCAAAACTGTGCTCATTATGGATGAGGTTGATGGGATGTCAGCTGGTGATAGGGGTGGTGTTGCTGATCTTATTGCTAGCatcaaaatatctaaaattccTATTATCTGCATTTGTAATGACCGTTACAGccagaaattgaaaagtcTCATCAACTATTGTTTGCTTCTTAGCTTTCGTAAACCTACAAAGCAACAGATGGCAAAGAGGTTGATGCAAGTTGCAAAAGCTGAAGGGCTTCAAGTTAATGAGATTGCTCTTGAGGAACTAGCAGAAAGAGTTAATGGAGATATGCGTATGGCACTAAACCAGCTACACTACATGAGCCTCTCCATGTCAGTTGTTAACTATGATGACATTAGACAACGCCTTCTTACCTGTTCAAAGGATGAAGACATTTCACCATTCACGGCTGTTGACAAGCTTTTTGGTTTTAATGCTGGGAAGTTAAAAATGGATGAGAGAGTTACCCTCAGCATGAGTGATCCTGATCTTGTTCCTCTAATTATACAggaaaattatcttaattatagACCCAGCTCGGCTGGTAAGGATGACAACAATGTGAAACGGATGAACTTGATAGCCCGTGCTGCTGAGTCTATTGCTGATGGGGATATAATGAATGTACAGATTCGAAGATATCAACAATGGCAGCTCTCTCAAGCTAGTTCGATTGCATCATGCATAGTTCCTGCGTCATTGTTGCATGGGCAAAGGGAAATACTTGAACAGGGAGAACGGAATTTTAATAGGTTTGGTGGTTGGCTGGGGAAGAACTCAACAATGGGTAAAAACTTGAGGCTTTTGGAAGATCTACATGTTCACATCCTTGCCTCTCGTGAATCTAATTCCGGAAGGGGAACCCTTCGATTCGAATACTTTACACTTCTTCTTAAGCAATTGACAGAACCACTGCGAACCCTGCCCAAGGATGAAGCTGTTCGTGAAGTTGTGGAATTTATGAACACTTACTCAATCACTCAGGAggatttttattctattgtaGAGTTATCGCAATTTAAGGGTCATCCAAATCCACTAGATGGCATACAGCCTGCTGTTAAATCAGCTCTGACTAAagcatacaaagaaaaaagcaaatcTAGGATGGTTCGAGCTGCAGATCTAGTTGCTCTTCCTGGAATGAAAAAGGCTCCTAAGAAGCGTATTGCTGCTATTCTAGAACCAGCTGATGAAGGACTGGAAAAGGGTGAAGGTGGTACACTGGAAGAGAgtgaagaagagaatgattcAGACACAGATGAACTGGGTACTGCCACTGGCGAGAAGCTGCAGTCAGAACTTCAAAGTTTAAATTCAAAGGCGATGCAAGTACAGTTGGATTTGAAGGGAACAGGAAATTCGGGTGCCAAGAACACGTCGGGTGGAAGAGGTAAAGGTGCTTCTGCGTCAGCTGAGAAGGTTGGGCAATCCTCAAGGGCTggtgcaaaaagaaagagata 3032 0.3987 MNGIDVFSVKPMLHSAKRGLIRIWCFLRQSGTIPRNENPLKLEGFLAPASKMSDIRKWFMKSHDKGNAGESKPTNQTKPSTAKSQPEKPAPGGQESSGRRKTSKYFDKDKQKPQDEVETKGLPAKRKNPKESEELLKPPPSKKIHEADKDDGDNSILPTSTKKSADNTPIKKAKSGSGRGIPQKSLELEESDEDDNKDSVSPLKSAGRGRGGKGASAQSTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSAKAKELGTAFLTEDGLFDMIRSSKPASKVAKAPSQKETKQLVNEVVASQPKSQQKAQAKANAVSQLSGSASAPAKPKKQSSVQSSFIWTEKYRPKVPNDIIGNQSLVKQLHDWLTHWHEQFLDSGNKKKGKKQNDSGSKKAVLLSGTPGIGKTTAAKLVSQMLGFQAIEVNASDSRGKADSKIEKGIGGSNANSIKELVTNEALGANMDRSKLSKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLINYCLLLSFRKPTKQQMAKRLMQVAKAEGLQVNEIALEELAERVNGDMRMALNQLHYMSLSMSVVNYDDIRQRLLTCSKDEDISPFTAVDKLFGFNAGKLKMDERVTLSMSDPDLVPLIIQENYLNYRPSSAGKDDNNVKRMNLIARAAESIADGDIMNVQIRRYQQWQLSQASSIASCIVPASLLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLEDLHVHILASRESNSGRGTLRFEYFTLLLKQLTEPLRTLPKDEAVREVVEFMNTYSITQEDFYSIVELSQFKGHPNPLDGIQPAVKSALTKAYKEKSKSRMVRAADLVALPGMKKAPKKRIAAILEPADEGLEKGEGGTLEESEEENDSDTDELGTATGEKLQSELQSLNSKAMQVQLDLKGTGNSGAKNTSGGRGKGASASAEKVGQSSRAGAKRKR 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02182 1010 Pfam ATPase family associated with various cellular activities (AAA) 451 562 IPR003959 GO:0005524|GO:0016887
Bva07g02182 1010 MobiDBLite consensus disorder prediction 433 453 - -
Bva07g02182 1010 Gene3D - 656 765 - -
Bva07g02182 1010 ProSiteProfiles BRCT domain profile. 252 333 IPR001357 -
Bva07g02182 1010 MobiDBLite consensus disorder prediction 236 251 - -
Bva07g02182 1010 MobiDBLite consensus disorder prediction 69 84 - -
Bva07g02182 1010 Gene3D - 584 654 - -
Bva07g02182 1010 MobiDBLite consensus disorder prediction 63 251 - -
Bva07g02182 1010 CDD BRCT_RFC1 252 330 - -
Bva07g02182 1010 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 644 IPR027417 -
Bva07g02182 1010 MobiDBLite consensus disorder prediction 931 945 - -
Bva07g02182 1010 PIRSF RFC1 50 985 IPR012178 GO:0003689|GO:0005524|GO:0005663|GO:0006260|GO:0006281
Bva07g02182 1010 MobiDBLite consensus disorder prediction 100 156 - -
Bva07g02182 1010 Pfam BRCA1 C Terminus (BRCT) domain 254 329 IPR001357 -
Bva07g02182 1010 MobiDBLite consensus disorder prediction 354 389 - -
Bva07g02182 1010 SUPERFAMILY BRCT domain 252 333 IPR036420 -
Bva07g02182 1010 Gene3D - 395 583 IPR027417 -
Bva07g02182 1010 Pfam Replication factor RFC1 C terminal domain 724 886 IPR013725 GO:0003689|GO:0005524|GO:0005663|GO:0006260
Bva07g02182 1010 SUPERFAMILY post-AAA+ oligomerization domain-like 655 800 IPR008921 GO:0003677|GO:0006260
Bva07g02182 1010 SMART BRCT_7 254 332 IPR001357 -
Bva07g02182 1010 Coils Coil 951 971 - -
Bva07g02182 1010 Gene3D BRCT domain 229 331 IPR036420 -
Bva07g02182 1010 SMART AAA_5 447 585 IPR003593 -
Bva07g02182 1010 PANTHER CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 67 981 - -
Bva07g02182 1010 PANTHER REPLICATION FACTOR C SUBUNIT 1 67 981 - -
Bva07g02182 1010 CDD AAA 444 547 - -
Bva07g02182 1010 MobiDBLite consensus disorder prediction 948 999 - -
Bva07g02182 1010 MobiDBLite consensus disorder prediction 917 1010 - -
Bva07g02182 1010 CDD HLD_clamp_RFC 584 642 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02182 52 964 Core DNA Replication Machinery Family AT5G22010 69.273 0.0 1159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02182 K10754 - gmx:100790070 1396.72