Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02164 ATGGCCAGAGGGGGTGGACTCCCCATTGATTCAGATCCAATTGGGAGCTTCTTTCTCCACAAGCCAATTGTTCTCAATTCTTTTCCTGAAGATAACAAACCCCAGTGGAAACTTAGTCCCATGGATGCTACTGTTAGCAACAAAAGGTCTTCACCCGGCAGTACCATCCCATTTCAAGTCAACCTTAACTGTGTCCGGGATAACCGCCACTCTCCGCCACTTTCTGACGATAAGAGAGCCATCATCAACGAGATGGACTTTTTTGCGGACAAGAACAACAAGGATGACAAGGTTGTCTCTGCCTCCGCTTCTGGTTCAGCTGATGCAACAGATAAACATGATTCTATTTCTACACCCATGTTGGAATTCAAAGTTAACaCTGGTCTGAATCTTCTTACTACTAACACTAGCAGTGACCAATCCATGGTTGATGATGACATATCACCCAATTTAGAAGATAGAAGAACCAAGAATGAGCTGGCAGTTCTTCAAGCTGAgcttgagaaaatgaaaatggagaatCATCACTTGCGAGGAGTGCTTGACGAATTGAGTACCAATTACAATACCCTGCACATGCATCTGGAGCGTGCGATGCAGGAGCAGAAGGGTGATGGCGCTGAAGAACATGAGGTGCTTGATGGGAAGgctgaagaaaagaaacaaactgGGAATGGAGGAACCTTGGTGCCAAGGCAGTTTATGGATCTTGGGTTGGCTACTAATGCAGATACGGATGAAGCTTCGCATTCTTCTTCAGCGGGAAGAAGCCAGGACCGGTCAGGATCATCGGGAAACAACGTTAAAGTGGCCTCCAAGAAATTTGGTAACAGGAAGAATGGGGTTAATGATGAAGTGCTTGTGTTTGATCAAGATAAGAAGGACTTTGTCAGGGGAGCTGAAAGAGATGAAAGCCCCACCCCACAAGATCAGGCTTTTGCTGCTAGTAAGGTTCCAAGATTCAGTCCTCCAAAAAACATTGACCAAACAGATGCTAGCATGAGGAAGGCAAGGGTCTCAGTTAGAGCTCGGTCAGAGGCACCAATGATCACTGATGGCTGCCAATGGCGCAAGTATGGGCAAAAAATGGCTAAAGGAAACCCGTGCCCTCGAGCTTATTATCGTTGCACCATGGCTGCTGGTTGCCCAGTTAGAAAACAGGTACAAAGGTGTGCTGAGGACAGGACAATCCTTATAACTACATACGAAGGCAACCACAGCCACCCTTTGCCACCCGCGGCAGTGGCAATGGCACAGACAACTTCATCAGCAGCAAGAATGCTACTTTCAGGATCAATGTCAAGTACAGATGGTCTAATGAATGCAAATTTCCTTACAAGGACACTGCTTCCTTGCTCTTCCAGCATGGCAACAATCTCAGCCTCAGCTCCATTCCCAACTGTTACATTGGACTTAACCCAGTCCCCAAACCCACTACAGTTTCCTAGGCCACCAAACCAATTTCAAATCCCTTTCCCCGGCGTCCCTCAGAATTTTGCCAATTCCCCAGCCTCATTGATACCCCAAATTTTTAGTCAGGCACTGTATAACCAATCAAAGTTCTCTGGTCTTCAAATGTCACAACATGTGGACCCTTCTCAATTGGGTAACCAATCTCAACAGGGACCAACACAACTCCTTGACTCAGTTAATGCTGTCACCGCTGCCTTAGGAGCTGATCCTAACCTCACTGCTGCTATAGCAGCAGCTATTGCTTCCATAGTGGGTGGTGCTCAGCCAAACAACAACAGTGGTAATAATGGTAACCAGACTGGGGCCAACAGTAGTGGCAATATTACAAccagcaacaacaacagcaacgGAAGCAATAAAATTAGCAATTCCAATTTCTCAAGGAATTA 1862 0.4479 MARGGGLPIDSDPIGSFFLHKPIVLNSFPEDNKPQWKLSPMDATVSNKRSSPGSTIPFQVNLNCVRDNRHSPPLSDDKRAIINEMDFFADKNNKDDKVVSASASGSADATDKHDSISTPMLEFKVNTGLNLLTTNTSSDQSMVDDDISPNLEDRRTKNELAVLQAELEKMKMENHHLRGVLDELSTNYNTLHMHLERAMQEQKGDGAEEHEVLDGKAEEKKQTGNGGTLVPRQFMDLGLATNADTDEASHSSSAGRSQDRSGSSGNNVKVASKKFGNRKNGVNDEVLVFDQDKKDFVRGAERDESPTPQDQAFAASKVPRFSPPKNIDQTDASMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHSHPLPPAAVAMAQTTSSAARMLLSGSMSSTDGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTQSPNPLQFPRPPNQFQIPFPGVPQNFANSPASLIPQIFSQALYNQSKFSGLQMSQHVDPSQLGNQSQQGPTQLLDSVNAVTAALGADPNLTAAIAAAIASIVGGAQPNNNSGNNGNQTGANSSGNITTSNNNSNGSNKISNSNFSRN 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02164 620 Gene3D WRKY domain 335 412 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva07g02164 620 PANTHER OS05G0567200 PROTEIN 52 605 - -
Bva07g02164 620 MobiDBLite consensus disorder prediction 133 152 - -
Bva07g02164 620 ProSiteProfiles WRKY domain profile. 345 411 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva07g02164 620 Pfam WRKY DNA -binding domain 352 409 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva07g02164 620 MobiDBLite consensus disorder prediction 244 273 - -
Bva07g02164 620 MobiDBLite consensus disorder prediction 580 620 - -
Bva07g02164 620 MobiDBLite consensus disorder prediction 300 334 - -
Bva07g02164 620 SUPERFAMILY WRKY DNA-binding domain 343 411 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva07g02164 620 MobiDBLite consensus disorder prediction 200 231 - -
Bva07g02164 620 MobiDBLite consensus disorder prediction 200 221 - -
Bva07g02164 620 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 605 IPR044810 GO:0003700
Bva07g02164 620 Coils Coil 153 173 - -
Bva07g02164 620 MobiDBLite consensus disorder prediction 244 277 - -
Bva07g02164 620 Coils Coil 181 201 - -
Bva07g02164 620 SMART WRKY_cls 350 410 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02164 Bva-Chr7 18193687 18196139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02164 50 590 WRKY Transcription Factor Family AT1G62300 47.695 9.71e-135 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva07g02164 WRKY 7.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02164 - - gmx:100127384 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00479 09 2541899 2544505 Bva07g02164 07 18193687 18196139 BWGD
Bva07g02164 07 18193687 18196139 Bva12g02724 12 19885875 19888701 ECH
Bva07g02164 07 18193687 18196139 Bva07g02164 07 18193687 18196139 ECH
Bva07g02164 07 18193687 18196139 Bva14g00627 14 2945691 2948103 ECH
Bva07g02164 07 18193687 18196139 Bva13g00528 13 2396866 2399356 ECH