Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02157 ATGGGCATGATAAAATCAGTCATCGGAGATGCAATTTTGACATCAATCTGGATTTTCTGCGTTTCAACTCTCAGGATTTTCACTGCAAAAAtagcttcttttcttggtctTCAAGCCGCATCACTTGCGGGCCTCTTTATCACCATCAATCTCAATACCGTCCTCGTCTTCACTATTAGCTTGATTGGGAGGATTCTGGGTGGTGCTAGCTTCAACCCCTCAACCACGGTTTCCTTCTACACCGCAGGGTTCAGGCCCGATGCATCGCTTGCTTCATTGGCTGTTAGATTCCCTGCTCAGGCAACGGGTGGGGCTCTTGGTGCCTCGTCAATTCTGCAAGTGATGCCAAATCAGTACAAGCACATGCTAAGGGGACCTTCTTTGAAGGTGGATTTGCATACCGGAGCTATAGCAGAGGGGACGTGcacttttcttcttaatttggCCATTCTTCTTGTTATGCTCAGGGGTCCTAGAAACCCATTGCTCAAGATCTACTTGCTTTCTGTGGCAACAGTGGCGTTGGTTACCCTAGGCTCCGGCTACACAGGACCTTCCATGAACCCAGCCAATGCCTTTGGATGGGCATATATAAACAACAAGCACAACACTTGGGagcaattttatgtttattggATATGTCCTTTCATAGGAGCAATTTTAGCTGCTCGGCTATACCGATTTCTGTTTATGGCACCAGTCAAGCAGAAGGAAGCTTG 719 0.4437 MGMIKSVIGDAILTSIWIFCVSTLRIFTAKIASFLGLQAASLAGLFITINLNTVLVFTISLIGRILGGASFNPSTTVSFYTAGFRPDASLASLAVRFPAQATGGALGASSILQVMPNQYKHMLRGPSLKVDLHTGAIAEGTCTFLLNLAILLVMLRGPRNPLLKIYLLSVATVALVTLGSGYTGPSMNPANAFGWAYINNKHNTWEQFYVYWICPFIGAILAARLYRFLFMAPVKQKEA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02157 239 Gene3D Glycerol uptake facilitator protein. 2 238 IPR023271 -
Bva07g02157 239 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 239 - -
Bva07g02157 239 PRINTS Major intrinsic protein family signature 5 24 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02157 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02157 239 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02157 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02157 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02157 239 SUPERFAMILY Aquaporin-like 3 234 IPR023271 -
Bva07g02157 239 Pfam Major intrinsic protein 3 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bva07g02157 239 PANTHER AQUAPORIN SIP1-1 1 239 IPR044222 GO:0015250
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02157 Bva-Chr7 18164228 18165189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02157 1 230 Major Intrinsic Protein MIP AT3G04090 50.000 1.27e-67 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02157 K09875 - gmx:100797126 339.347