Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02144 ATGAACGACCTCCTTACGGATTCCTTTGTTAGTGACGGTAAAGGTCTGCCTTCAAGACAAAATGATATTGAGATGGGAATTCAGGTTCCGAGGAGCAATCCTGATATGGGAATGGAAGCTTTTAACAAGCAGATTCAAGAAACTGAAAAACAAGTTGATAAGCTGTCTGAGCTACTTAGAAAACTAAAGGCTGCTAATGAGGAGTCCAAGTCTGTTACAAAAGCATCTGCCATGAAAGCTATCAAGAAGAGGATGGAGAAAGATATTGATGAAGTTGGAAAGATTGCACGAAATGTCAAAGCAAGAATTGAAGCTATAAACAAAGATAACATAGCCAATAGACAAAAGCCTGGTTGTGAGAAGGGGACTGGTATTGACAGAGCAAGGATGAATATGACAAATTCCTTGACAAAAAAGTTCAAGGATCTAATGACAGAGTTTCAGACTCTTAGGCAAAGAATACAAGATGAATATCGTGAGGTTGTGGAAAGAAGAGTTATTACAGTCACGGGAACCAGGCCAGATGATGAGACAATTGACAACCTGATAGAAACTGGAAAGAGCGAGCAAATCTTTGAGAAGGCAATTCTAGAAATGGGCCGAGGACAGGTGTTAAACACACTGGAAGAAATTCAAGAGAGACATGATGCagtgaaagaaattgaaaaaaagctTCTTGATTTACATCAGATTTACCTAGACATGGCTGTCTTAGTTGAAGCTCAAGGAGAAATTTTGGATAACATTGAAAATCAGGTGACAAACGCTACGGATCATGTGAGAACAGGTACAGATGCTCTTCGAACCGCAAAGAGTTTGCAAAATAAGTCAAGGAAATGCATGATGATTTCCATTATATTGCTCCTTGTCATTGCCATCATCATCGTGCTCTCTATCTTGAAACCGTGGAAGAAGTA 917 0.3871 MNDLLTDSFVSDGKGLPSRQNDIEMGIQVPRSNPDMGMEAFNKQIQETEKQVDKLSELLRKLKAANEESKSVTKASAMKAIKKRMEKDIDEVGKIARNVKARIEAINKDNIANRQKPGCEKGTGIDRARMNMTNSLTKKFKDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDNLIETGKSEQIFEKAILEMGRGQVLNTLEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVEAQGEILDNIENQVTNATDHVRTGTDALRTAKSLQNKSRKCMMISIILLLVIAIIIVLSILKPWKK 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02144 305 CDD SynN 38 195 IPR006011 GO:0016020
Bva07g02144 305 MobiDBLite consensus disorder prediction 1 20 - -
Bva07g02144 305 Gene3D - 34 162 - -
Bva07g02144 305 SMART tSNARE_6 203 270 IPR000727 -
Bva07g02144 305 Gene3D - 199 301 - -
Bva07g02144 305 SUPERFAMILY t-snare proteins 35 263 IPR010989 GO:0016020|GO:0016192
Bva07g02144 305 SMART SynN_4 33 159 IPR006011 GO:0016020
Bva07g02144 305 CDD SNARE_syntaxin1-like 207 269 - -
Bva07g02144 305 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 208 270 IPR000727 -
Bva07g02144 305 PANTHER SYNTAXIN 4 299 IPR045242 -
Bva07g02144 305 Coils Coil 38 75 - -
Bva07g02144 305 Pfam Syntaxin 41 243 IPR006011 GO:0016020
Bva07g02144 305 Pfam SNARE domain 244 296 IPR000727 -
Bva07g02144 305 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 4 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02144 Bva-Chr7 18105391 18110739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02144 1 303 SNARE and Associated Proteins AT3G03800 59.672 1.69e-120 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02144 K08486 - twl:119991313 482.641