Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02141 ATGCCAGCGGGGATTATGATTCCGGTGAGAAACATGCCCTCTATGATTGGAAGAAACGGCAGCGTTGGTGTCTTTGGATCATCTTCCGGCCTCTCTCTCGGACAGTCAAACTTGATGGATGGCCAGCTCCACCCACTGGACATGGCTCAAAACACACCCGAAAGCGATGTCCCCAGAATCCGAGACGATGACTTCGACACTGCCACCAAGTCCGGCAGCGACAACCCTGAAGGTGCCTCCGGCGACGACCAAGACCCACGTCCCAAGAAGAAGCGCTACCACCGCCATACCCAGCATCAGATCCAGGAAATGGAAGCATTCTTCAAGGAGTGTCCACACCCAGATGACAAGCAAAGGAAGGAGCTTAGCAGGGAATTAGGGTTAGAGCCTTTGCAAGTCAAGTTTTGGTTCCAAAACAAGCGCACGCAGATGAAGACCCAGCACGAGCGCCAAGAGAACACACAACTTAGAAATGACAATGATAAGCTTAGAGCTGACAACATGAGATATAGGGAAGCTCTTAGCAATGCCTCATGCCCTAATTGCGGTGGACCCACTGCCATTGGAGAAATGTCCTTTGATGAGCATCACTTGAGGCTTGAAAATGCCCGGCTCAGGGAGGAGattGATCGGATTTCAGCCATTGCGGCCAAGTACGTGGGCAAGCCTGTGGTGAACTATCCACTGCTTTCGCCTTCGGTTCCTCCTCGCCCGCTAGAACTTGGAGTTGGTGGTTTTGGTGGCCAACCAGGGATGGGTGGTGGCGATATGTATGGTGCTGGAGATCTTCTCAGGTCAATCAGTGCACCTACCGAAGCTGATAAACCAATGATAATCGAGCTTGCTGTTGCGGCTATGGAGGAACTCGTCAGAATGGCACAAATGAGTGAACCCCTTTGGATGACTACCCTTGATGGTTCTACTGCTATGCTCAACGAAGATGAATACATTAGAACATTTCCTCGAGGAATTGGTCCAAAACCCACTGGATTCAAATGTGAAGCTTCAAGAGAAACTGCTCTTGTTATCATGAATCACATTAACCTTGTTGAGATTCTCATGGATGTGAACCAGTGGTCCAACGTTTTCTCTAGTCTAGTCTCAAGAGCAATGACTCTGGAAGTACTCTCAACAGGAGTTGCTGGGAACTACAACGGTGCCCTACAAGTGATGACAGCAGAGTTACAAGTACCTTCACCTCTTGTTCCAACTCGAGAGAGTTATTTTGTGAGGTACTGTAAACAGCACGCGGATGGGACATGGGCAGTAGTGGATGTGTCCTTGGATAATTTACGCCCTAGTCCTTCGGTGAGATGTAGAAGAAGACCTTCGGGTTGCTTAATTCAAGAGATGCCAAATGGCTACTCAAAGGTTACATGGGTGGAGCATGTAGAAGTGGATGACAGAGGCGTTCATAATTTGTACAAGCAACTTGTAAACTCTGGACATGCATTTGGTGCAAAACGTTGGGTTGCAACCTTGGATAGACAATGTGAAAGGCTTGCTAGTGCCATGGCCACAAACATCCCCACCGGTGAAGTCGGGGTCATAACAAATCAAGAAGGTAGGAAGAGTATGTTGAAGCTGGCTGAGAGAATGGTTATAAGCTTTTGTGCTGGAGTGAGTGCTTCCACTGCTCATACATGGACTACACTCTCTGGGACTGGTGCTGATGATGTGAGGGTCATGACCCGCAAGAGTGTAGATGACCCTGGAAGACCTCCTGGCATTGTTCTAAGTGCTGCTACTTCGTTTTGGCTTCCAGTTCCTCCAAAGAGAGTCTTCGATTTCCTCCGTGATGAGAACTCCAGAAGTGAGTGGGATATTCTTTCCAACGGCGGAGTTGTCCAAGAAATGGCGCATATAGCTAATGGCCGAGATACAGGAAATTGTGTGTCTCTACTTAGAGTGAATAGTGCCAATTCAAGCCAGAGCAACATGTTGATATTGCAAGAGAGTTGCACCGATTCAACAGGCTCCTTTGTTATTTATGCTCCGGTAGATATTGTTGCCATGAACGTGGTTCTAAATGGAGGGGACCCGGACTATGTAGCCCTGCTTCCTTCAGGATTTGCCATCCTCCCAGATGGAACCACAGCCCATGGAGGTGGCATTGGTGAAACTACACATGGTGGATCTCTCTTGACTGttgcttttcaaattttggttGATTCAGTTCCAACAGCAAAGCTTTCTCTTGGATCTGTTGCTACCGTTAATAATCTCATTGCTTGCACTGTTGAGAGAATTAAGGCTTCTTTATCATGCGAAGCTGCTTG 2279 0.4778 MPAGIMIPVRNMPSMIGRNGSVGVFGSSSGLSLGQSNLMDGQLHPLDMAQNTPESDVPRIRDDDFDTATKSGSDNPEGASGDDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERQENTQLRNDNDKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSPSVPPRPLELGVGGFGGQPGMGGGDMYGAGDLLRSISAPTEADKPMIIELAVAAMEELVRMAQMSEPLWMTTLDGSTAMLNEDEYIRTFPRGIGPKPTGFKCEASRETALVIMNHINLVEILMDVNQWSNVFSSLVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSVRCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVNSGHAFGAKRWVATLDRQCERLASAMATNIPTGEVGVITNQEGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTTAHGGGIGETTHGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAA 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02141 759 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 45 756 IPR042160 -
Bva07g02141 759 Gene3D - 77 163 - -
Bva07g02141 759 CDD START_ArGLABRA2_like 275 499 - -
Bva07g02141 759 ProSitePatterns 'Homeobox' domain signature. 122 145 IPR017970 GO:0000981|GO:0006355
Bva07g02141 759 Gene3D - 329 500 IPR023393 -
Bva07g02141 759 ProSiteProfiles 'Homeobox' domain profile. 87 147 IPR001356 GO:0003677
Bva07g02141 759 Coils Coil 146 173 - -
Bva07g02141 759 CDD homeodomain 90 148 IPR001356 GO:0003677
Bva07g02141 759 SUPERFAMILY Bet v1-like 519 751 - -
Bva07g02141 759 SMART START_1 280 500 IPR002913 GO:0008289
Bva07g02141 759 Pfam Homeodomain 90 145 IPR001356 GO:0003677
Bva07g02141 759 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 45 756 - -
Bva07g02141 759 SUPERFAMILY Bet v1-like 271 502 - -
Bva07g02141 759 MobiDBLite consensus disorder prediction 56 70 - -
Bva07g02141 759 SUPERFAMILY Homeodomain-like 76 147 IPR009057 -
Bva07g02141 759 Pfam START domain 281 500 IPR002913 GO:0008289
Bva07g02141 759 ProSiteProfiles START domain profile. 271 503 IPR002913 GO:0008289
Bva07g02141 759 SMART HOX_1 88 151 IPR001356 GO:0003677
Bva07g02141 759 MobiDBLite consensus disorder prediction 36 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02141 Bva-Chr7 18081771 18087458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02141 33 759 Homeobox Transcription Factor Family AT1G05230 78.474 0.0 1161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva07g02141 START 8.3e-62 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02141 K09338 - jre:108982131 1335.86