Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02139 ATGGAATTCCACGGGATTACAAGGAACGGTGGCGTGGTTATAGTCAGCAAATTATTCCTCGCTGTTTTTTGCCTGTGGATTCCAACGCAAGCTGTGGGTAGGACAGGAAATACAACTGTAAATGCCACTGTTCCTTCAAGACCAAGCGTTGTAAGAATTGGAGCCCTGTTTACTATCAATTCGGTCATTGGAAGATCGGCTAAACCAGCAATTTTAGCTGCCATCGATGATGTTAACGCTGATAAGAGCATTCTCCCTGACACTAAAGTGGAAGTTATTTTACATGATACAAACTGCAGTGGCTTTCTTGGTACAGTAGAAGCTCTGCAGTTGATGGAGAATGAAGTCATTGCTGCTATTGGTCCACAGTCCTCTGGAATAGCTCATGTCATCTCTCATGTGGTTAATGAACTCCATGTACCCCTTGTGTCGTTTGGGGCAACCGATCCTACTCTCTCAGCTCTGCAGTACCCATATTTCCTCCGCTCTACCCAGAATGACTATTTTCAAATGTATGGAATCGCAGACTTTCTTGACTATTACGGATGGAGGGAAGTCATTGCCATTTTTGTAGATGACGATAATGGAAGAAATGGGATCACTGTACTGGGTGATGCCCTGGCAAAGAAACGTGCCAAGATCTCCTATAAGGCTGCCTTCAGTCCTGGAGCTAACATAAGTGATATCACTGACTTGTTAGCTGGAGTGAACCAAATGGAATCACGGGTCTTCGTTGTGCATGTTAATCCCGATACTGGTTTGAGAATTTTCTCTGTTGCTACGAAACTTGGGATGATGACTGGTGGCTACGTCTGGATTGCAACAGATTGGCTTCCTTCGGTGCTAGATTCTTCAGATCAACGGGCTAACCCTGAGATAATGAACCTCATACAAGGGGTTGTTGCGTTCCGACATCATACTCCTGATACTGATCTCAAAAGGAGGTTTGTCTCTCGGTGGAATAACCTTAAAGACAAGGAGACTGCAAGCTTCAATTCCTATGCACTTTATGCATATGATTCCGTTTGGTTGGTCGCTCGAGCTTTCGATGTTTTCTTGAAAAACGGTGGAGCTCTGTCTTTCACTAATGACCCTAGGTTGCATGACACAAGAGGAAGCTCGTTGCACTTATCATCACTTCGTGCTTTTGAAGGTGGCCCACAGTTTCTCCAGACAATCTTGAGTATGAACTTCACTGGTTTAAGTGGACAAATTCAGTTTGATATGGATAAGAATTTGGTTCGTCCAGCATATGACATTCTAAACATTGGCGGATCTGGGATGCGTAGCATTGGTTATTGGTCTAATTACTCTGGTCTGTCTGTTGAGGCTcctgaaattttatataagaaaCCTCCCAATGCTTCAACTAGTAATCAAAAACTACTTAGTGTGATATGGCCAGGAGACACTACAACTAAACCTAAGGGATGGGTGTTTCCCTTCAAAGGAAAGCCACTACGCATAGCAGTGCCAAACCGAGTAATTTACCCAGAGTTTGCTACCAGAGACAAGAATTCGGGGGTCAAAGGTTATTGCATTGATGTCTTCGAAGCAGCAGTAAAGTTGTTACCTTATGCTGTCCCACTGCAATATATACTATATGGCCAAGGTGATAGAAATCCTGACTACAACAATCTTGTGTATGAGGTTGCACAAAATAACTTCGATGCAGCTGTCGGAGATGTTACAATTATTACAAATAGGACAAGGATTGTGGATTTTACTCAACCTTACATGGAATCAGGTCTGGTCGTGGTTGTTCCCGTCGAGGAGGTAAAGTCAAGCCCTTGGTCTTTCCTTAAGCCATTCACTGCTCAAATGTGGTGTGTCACCGgtgccttctttttctttgtgggAGCTGTTGTATGGATTCTTGAGCATCGGACGAATCATGAGTTCCGTGGTCCACCAAGGAAACAACttgtaacaattttttgGTTTAGTTTCTCAACAATGTTTTTCTCACACAAGGAGACTACCGTGAGCACTCTGGGACGATTGGTGCTAATCATATGGCTTTTTGTGGTGTTAATCATCAATTCAAGCTACACAGCTAGTTTGACATCCATCCTCACAGTGCAGAAACTGTCATCACAAATTGAAGGAATTGACAGTCTTATATCAAGTACTCAACCAATTGGAGTTCAAGATGGGTCATTTGCAAAGAAGTATCTGACAGATGAGCTCAATATAGCAGAGTCCAGGATTGTTACGTTGAAATCCCAGCAAGATTATATTGATGCCCTTCAGCGTGGACCAAAAGCTGGAGGGGTAGTAGCTATTGTTGATGAGCTTCCCTACATTCAGCTTTTCATTTCCAACACCAACTGCCGGTTCAGAACTGTAGGACAGGAGTTTACCAGAAGTGGATGGGGATTTGCATTTCAGAGGGACTCTCCCCTTGCTGTTGACCTCTCAACCGCCATTCTCCAACTGTCTGAGAATGGTGACCTGCAAAAGATGCATGATAAATGGCTGACAAGAAATGAGTGTACTCAGGAGAATGACATTGACTCGAACCAACTGTCTCTCCAGAGCTTCTGGGGGCTTTTCCTTGTATGCGGGATAGCATGTCTCCTTGCTTTGATTGTCTTCTTTACGCGGGTGTTCTGTCAATATATGAGGTTCATCCCAGAAGATGAGGAGGAGAAGGAGGTTGATGAGGAAATCCAACCAACCAAGACTAGAAGCTTCAAAGGCATGATGGATTTTGTAGATAGAAAAGAAGCAGATATTAAGAAGATCCGAAGGCAACAGAGGAAAGACAGAGAAAGCAACATTGATGAGCAATCCAGTAGTTCATCCACAAGATTTCGAACCCCTAGTAGCTTCAGGGACATAATCAGTTTTATAGATGATAAAGAAGCGGATATCAAGGAAAAGATTCACAGGCAGAAGAGGAAACAGAGAGGCAGGAGCTTAGATGAGCAATCCAATTCACCCACCTTATA 2954 0.4282 MEFHGITRNGGVVIVSKLFLAVFCLWIPTQAVGRTGNTTVNATVPSRPSVVRIGALFTINSVIGRSAKPAILAAIDDVNADKSILPDTKVEVILHDTNCSGFLGTVEALQLMENEVIAAIGPQSSGIAHVISHVVNELHVPLVSFGATDPTLSALQYPYFLRSTQNDYFQMYGIADFLDYYGWREVIAIFVDDDNGRNGITVLGDALAKKRAKISYKAAFSPGANISDITDLLAGVNQMESRVFVVHVNPDTGLRIFSVATKLGMMTGGYVWIATDWLPSVLDSSDQRANPEIMNLIQGVVAFRHHTPDTDLKRRFVSRWNNLKDKETASFNSYALYAYDSVWLVARAFDVFLKNGGALSFTNDPRLHDTRGSSLHLSSLRAFEGGPQFLQTILSMNFTGLSGQIQFDMDKNLVRPAYDILNIGGSGMRSIGYWSNYSGLSVEAPEILYKKPPNASTSNQKLLSVIWPGDTTTKPKGWVFPFKGKPLRIAVPNRVIYPEFATRDKNSGVKGYCIDVFEAAVKLLPYAVPLQYILYGQGDRNPDYNNLVYEVAQNNFDAAVGDVTIITNRTRIVDFTQPYMESGLVVVVPVEEVKSSPWSFLKPFTAQMWCVTGAFFFFVGAVVWILEHRTNHEFRGPPRKQLVTIFWFSFSTMFFSHKETTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQKLSSQIEGIDSLISSTQPIGVQDGSFAKKYLTDELNIAESRIVTLKSQQDYIDALQRGPKAGGVVAIVDELPYIQLFISNTNCRFRTVGQEFTRSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKMHDKWLTRNECTQENDIDSNQLSLQSFWGLFLVCGIACLLALIVFFTRVFCQYMRFIPEDEEEKEVDEEIQPTKTRSFKGMMDFVDRKEADIKKIRRQQRKDRESNIDEQSSSSSTRFRTPSSFRDIISFIDDKEADIKEKIHRQKRKQRGRSLDEQSNSPTL 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02139 984 PIRSF IGluLR_plant 12 950 IPR017103 -
Bva07g02139 984 MobiDBLite consensus disorder prediction 916 941 - -
Bva07g02139 984 Gene3D - 720 831 - -
Bva07g02139 984 Gene3D - 597 719 - -
Bva07g02139 984 Gene3D - 481 596 - -
Bva07g02139 984 Pfam Bacterial extracellular solute-binding proteins, family 3 497 828 IPR001638 -
Bva07g02139 984 Gene3D - 166 440 - -
Bva07g02139 984 Pfam Ligand-gated ion channel 829 859 IPR001320 GO:0015276|GO:0016020
Bva07g02139 984 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 931 - -
Bva07g02139 984 MobiDBLite consensus disorder prediction 960 984 - -
Bva07g02139 984 SUPERFAMILY Periplasmic binding protein-like II 462 829 - -
Bva07g02139 984 SMART GluR_14 488 829 IPR001320 GO:0015276|GO:0016020
Bva07g02139 984 Gene3D - 70 415 - -
Bva07g02139 984 CDD PBP1_GABAb_receptor_plant 52 444 IPR044440 -
Bva07g02139 984 CDD GluR_Plant 485 827 - -
Bva07g02139 984 Pfam Receptor family ligand binding region 68 424 IPR001828 -
Bva07g02139 984 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 124 152 - -
Bva07g02139 984 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 64 80 - -
Bva07g02139 984 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 338 350 - -
Bva07g02139 984 PANTHER GLUTAMATE RECEPTOR 3.4 42 931 - -
Bva07g02139 984 SUPERFAMILY Periplasmic binding protein-like I 46 479 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02139 Bva-Chr7 18071265 18076146 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02139 47 794 Ion Channels AT1G05200 68.491 0.0 1109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02139 K05387 - qsu:112026600 1346.26