Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02138 ATGCAAATGGCCGTTTCTGATGTTAATGCAGACCCAAGAGTTCTTAAGGGGACGAAATTGAAGTTGATAATAGAGGATGCAAATTGCAGCGTCTTTGTGGGATCAATTGGAGCTTTTCGAGCACTTGAGCAAGGGATTGCAGCCATAATTGGTCCACAGTCATCTTCCATAGCTCATACGATTTCTCAAGTTGCTAATGGCCTCCAAGTTCCTCTTGTTTCATATGCTGCTACTGATCCGACCCTGTCCTCCCTTCAGTATCCTTACTTTTTTCGTACTACACAAAGTGACTCTGAGCAAATGGCTGCAATGGCTGAGCTAATTGACTTTTATGAATGGAAAGATGTCATCGCCATCTTTGTAGATGAAGATTATGGAAGGAACGGGATATTTGCTTTGGGCGACGAACTTGAGAGGAGGAGACTGAGGATTACTCATAAATTAGCTTTGAGTATTCAGCTTGATCTGGATGAAATCACTCAAATGCTTAATGAATCTAAAGTTTATGGTCCTCGTGTATACGTTGTTCATGTCAACCCGGATCCCAGGCTCAGAATTTTTAGCATAGCCCAGAAACTTCAAATGATGACTAGTGACTATGTTTGGTTTGCTACGGACTGGCTCTCTGCTACCCTAGATTCATTCTCCCCGGTGAATCAGACATATCTGAGCATCCTCCAAGGCGTGGTTGGACTTCGTCCACACATTCCAGATTCTgttcaaaagagaaattttgtttctcgGTGGAAAAAAATGCAGCAAGAAGGTTTAGCAATTACTGGCTTGAATGTCTATGGATTTTATGCATATGATACAATTTGGGCAGTTGCACGTTCAATAGATAAGTTTGTAGAAGTATACAAAAATGTTACATTCTCTTTCAGTAACTATACACTACCCCATTCAGAAGCTGCTGGTATTCAGTTTGACAAGCTAAAAGTACTCGCTGGGGGATCTGATCTGGCTTACATATTATCCCAATCAAATTTTACTGGTGTGGGTGGTCAAGTTCAATTTAATTCAGAGAGGAACATCATAAGCAGTGGTTATGATGTTATGAATATCAATCAGAAGGCAATTACCAGGGTTGGTTATTGGTCTAAATCTTCTGGATTTTCAGTTGCACCTCCTGAAATTCATACTAAGAAGGAAAATAGCAGTTTTAACCAAGATCAGAAGCTTAATAACATTACTTGGCCAGGAGGACAGACGGGGAGGCCACGAGGTTGGGTGATTGCCGATAATGCAAGGCCGCTGAAAATTGGAGTACCCAAGAGAGCAAgttttgttgaatttgttaCTGAACTTCCTAAGACTCACGAAATTCAGGGGTACTGCATTGATGTCTTCAAGAAAGCATTGGAGTTCATACCATATGCTGTTCCTTATGAATTTGAGCCTTTTGGGAATGGTCGGTTAAATCCCAATTATGATGATCTCGTGAAGGCAGTTGCTGAAGAAGTATATGATGCAGTTATAGGAGACATTGCGATAGTGACGAACCGAACAAAGTTTGTGGATTTTTCTCAGCCTTTTGCAACAAGTGGTCTTGTTGTAGTGGCTCCAATCGACAATGAATCAAGTGCTTGGGTGTTTATCAAGCCATTTTCAACAGAGATGTGGTGTGCCACTGCAGCTTCATTTATGATGATTGCAGTGGTCATATGGATTCTCGAGCACCGAGTCAATGACGATTTCCGTGGTCCTCCTAAGAAACAAGTTGTGACGATGTTTATGTTCAGCCTCTCAACACTGTTTAAAACAAATCAGGAAAGGACAGTAAGCACACTTGGTCGAATGGTAATGATAGTATGGCTTTTCCTATTGATGGTGATCACAGCCAGCTATACAGCCAGCTTGACTTCAATTCTCACAGTGGAACAGCTTTCATCACCCATCACAGGAATCGATAGCTTGATTGCAAGTAACTGGCCCATAGGATACCAAGTAGGGTCATTTGCTTACAGCTATATGACCGAGAGTCTTTACGTGCCAGGATCAAGACTTGTTGCTCTAGGTTCCCCGGAAGAATACGCAAGCGCTCTGCAGCGAGGACCTAGTGCGGGAGGGGTGGCTGCCATCGTAGATGAGCTTCCATATGTGGACTTATTTCTGTCAACGCAAACTGATTTTGGTATTATTGGACAGCCATTTACCAAAAGCAGCTGGGGATTTGCTTTTTCAAGAGACTCCCCTCTCGCCGTTGACATGTCTACAGCAATCTTGAAACTTTCCGAGAGTGGACAGCTTCAGAAGATACGAGAGCATTGGTTCTGTAAGATGGGTTGTCCTGGAGAAAGGATAAGCAAATCCCAGTCAAACCAACTTCACATGATTAGCTTTTGGGGTCTATACCTCTCATGTGGCGTTGTCACTCTTGCAGCATTTGTAGCGTATGTGCTGCGAACAATTTGCCAATTTGTTCGCTACAAACGAAGGCAGAAGGATCTTACACCTCCTTCATCTTCATTGCCACCAGGAAGCCGTTGTTCCCAGGTCgtttataacttttttgacTTCATTGATAAGAAGGAAGAAGCCATCAAGAAAATGTTCACTCAGCCAAACAACCCACAACAGCGACTGAGCTG 2591 0.4207 MQMAVSDVNADPRVLKGTKLKLIIEDANCSVFVGSIGAFRALEQGIAAIIGPQSSSIAHTISQVANGLQVPLVSYAATDPTLSSLQYPYFFRTTQSDSEQMAAMAELIDFYEWKDVIAIFVDEDYGRNGIFALGDELERRRLRITHKLALSIQLDLDEITQMLNESKVYGPRVYVVHVNPDPRLRIFSIAQKLQMMTSDYVWFATDWLSATLDSFSPVNQTYLSILQGVVGLRPHIPDSVQKRNFVSRWKKMQQEGLAITGLNVYGFYAYDTIWAVARSIDKFVEVYKNVTFSFSNYTLPHSEAAGIQFDKLKVLAGGSDLAYILSQSNFTGVGGQVQFNSERNIISSGYDVMNINQKAITRVGYWSKSSGFSVAPPEIHTKKENSSFNQDQKLNNITWPGGQTGRPRGWVIADNARPLKIGVPKRASFVEFVTELPKTHEIQGYCIDVFKKALEFIPYAVPYEFEPFGNGRLNPNYDDLVKAVAEEVYDAVIGDIAIVTNRTKFVDFSQPFATSGLVVVAPIDNESSAWVFIKPFSTEMWCATAASFMMIAVVIWILEHRVNDDFRGPPKKQVVTMFMFSLSTLFKTNQERTVSTLGRMVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNWPIGYQVGSFAYSYMTESLYVPGSRLVALGSPEEYASALQRGPSAGGVAAIVDELPYVDLFLSTQTDFGIIGQPFTKSSWGFAFSRDSPLAVDMSTAILKLSESGQLQKIREHWFCKMGCPGERISKSQSNQLHMISFWGLYLSCGVVTLAAFVAYVLRTICQFVRYKRRQKDLTPPSSSLPPGSRCSQVVYNFFDFIDKKEEAIKKMFTQPNNPQQRLS 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02138 863 SUPERFAMILY Periplasmic binding protein-like II 397 758 - -
Bva07g02138 863 SUPERFAMILY Periplasmic binding protein-like I 1 410 IPR028082 -
Bva07g02138 863 Gene3D - 1 347 - -
Bva07g02138 863 CDD GluR_Plant 417 758 - -
Bva07g02138 863 Gene3D - 530 660 - -
Bva07g02138 863 PIRSF IGluLR_plant 1 860 IPR017103 -
Bva07g02138 863 Gene3D - 414 529 - -
Bva07g02138 863 SMART GluR_14 418 760 IPR001320 GO:0015276|GO:0016020
Bva07g02138 863 Gene3D - 96 372 - -
Bva07g02138 863 Pfam Bacterial extracellular solute-binding proteins, family 3 420 758 IPR001638 -
Bva07g02138 863 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 860 - -
Bva07g02138 863 PANTHER GLUTAMATE RECEPTOR 3.7 1 860 - -
Bva07g02138 863 Gene3D - 706 765 - -
Bva07g02138 863 Pfam Receptor family ligand binding region 1 356 IPR001828 -
Bva07g02138 863 Pfam Ligand-gated ion channel 759 790 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02138 Bva-Chr7 18064172 18069337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02138 1 860 Ion Channels AT2G32400 55.069 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02138 K05387 - gmx:100796389 1283.86