Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02121 atGGAACCTCTATGCGAGTTCTGTGGTGAGTTAAGAGCTGTCGTTTACTGCAAATCCGATTCTGCCCGTCTCTGCTTGTATTGCGATGGCAGCGTACATTCTGCCAATTCTTTGTCGCGCAGGCATCCCCGTTCACTCCTATGTGATAAGTGCAATATTCAGCCTGCAATTGTCCGCTGCATGGATGAAAAAATCTCTGTTTGTCAAGGTTGTGACTGGATTCGAAATTCCTGTTCCGTGTTGGGACACCGGCGCCATGCGTTGACTTGTTACACGGGTTGTCCCTCTGTTTCTGAATTATCTGGGATATGGTCTTCTGTTCTTGATACTGGTTTTAATAATGCTTGGGGATCAGTTAATACATTGCCTAAAAGTGATAACTGCTCTACCAAGTGTTTGGAGGAACTGGATAATGATGGCTCTTTTGGCTTGGTGACTGGCAAGTTCAATGATATAGAACCTTGGATGGGGCAATCTCCTTTAATTCCACCAAATCCCACTGACATGCCGTACTGCAGAGATCAACCTCTGTTATTTCCTCAAGTGTTAAGCTTGCCAAAGGGATGTCCTAATTTCAAGGATCTTGGAATCCAAGATGGTGATGGTCTTTGTGAAGGTTTAAACATAGATGatgttcaattaaatttagaaagcAGTGATGATATATTCGGCTGCACTCAAGGTGCCACCAGATTGCAGATTGAGGATGGAGGAATTGACTGTCTCTTAATGGAAAAGAACATATCAGTTACAGAATCTAATGTTCTTCCTGAGAATGCCTTGGAGGCATCATCATCAGTCCAACAAGAATGTGTGCCTTTTCAGTCATCCAGAGCTGGTGGGTCAGCTGGTGTGATGCAGGCCATCAATGGCAGTGCAAATGGTGTACTTATGAATCCAAGCTGCAACGGAAACATCAATCTGGGATTTCCTCAGGGTCAAGTTCCTTCAAGTATATCACTTTCATTGTCAAACATCACTGGTGAAAGCAGTGCTACAGATTATCAAGATTGTGGTTTATCACCTGTATTTCTGACAGGTGATCATACCCCGTGGGAATCAAATTTGGAACCTGCATGCCCACAAGCGAGGGACAAAGCTAAAATGAGATACAacgagaaaaagaaaactcgaATGTTTGGCAAACAAATAAGATATGCTTCTCGCAAAGCCCGAGCTGATACCAGAAAACGTGTGAAAGGAAGATTTGTGAAAGCAGGTGAAGCATATGATTATGATCCTTTGGTGACAAGGAACGTATA 1262 0.4216 MEPLCEFCGELRAVVYCKSDSARLCLYCDGSVHSANSLSRRHPRSLLCDKCNIQPAIVRCMDEKISVCQGCDWIRNSCSVLGHRRHALTCYTGCPSVSELSGIWSSVLDTGFNNAWGSVNTLPKSDNCSTKCLEELDNDGSFGLVTGKFNDIEPWMGQSPLIPPNPTDMPYCRDQPLLFPQVLSLPKGCPNFKDLGIQDGDGLCEGLNIDDVQLNLESSDDIFGCTQGATRLQIEDGGIDCLLMEKNISVTESNVLPENALEASSSVQQECVPFQSSRAGGSAGVMQAINGSANGVLMNPSCNGNINLGFPQGQVPSSISLSLSNITGESSATDYQDCGLSPVFLTGDHTPWESNLEPACPQARDKAKMRYNEKKKTRMFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLVTRNV 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02121 420 CDD Bbox1_BBX-like 4 47 - -
Bva07g02121 420 SMART bboxneu5 1 47 IPR000315 GO:0008270
Bva07g02121 420 PANTHER CCT MOTIF FAMILY PROTEIN-RELATED 2 418 - -
Bva07g02121 420 Pfam CCT motif 364 406 IPR010402 GO:0005515
Bva07g02121 420 ProSiteProfiles CCT domain profile. 364 406 IPR010402 GO:0005515
Bva07g02121 420 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bva07g02121 420 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02121 Bva-Chr7 17985713 17987977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02121 1 414 C2C2-CO-like Transcription Factor Family AT3G21880 41.866 6.22e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bva07g02121 CCT 5.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02121 - - cic:CICLE_v10015305mg 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02121 07 17985713 17987977 Bva07g02121 07 17985713 17987977 ECH