Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02120 ATGTGCAAAGGTGCAGAAGAGGGAAAGCATGCTAGCTTCTGCAAGAGCTTTAGACCTGAAGAAGAGTTTGCTTCACATGGCACAACCAGAGGCTCAGTGTCTTGCGAGCTGTGCGGGTTAAAGGCTTCATTATATTGCCAAGCCGATGATGCATATTTGTGTAGAAAATGTGACAAATTGGTTCACAAAGCCAATTTCTTGGCCCTCAGGCACGTCAGGAGCTTTCTCTGCAAAACATGTCAAAACCTTACCCAGCGATATCTGATTGGAGACACAGTGGAGTTTTTTCTCCCAGCCATCTTCAGTTGGGCAGGAGGAAGTCTCCCTAACACAAGCACCGAAAGAAAGTGTTCAAGAATGCAATA 365 0.4575 MCKGAEEGKHASFCKSFRPEEEFASHGTTRGSVSCELCGLKASLYCQADDAYLCRKCDKLVHKANFLALRHVRSFLCKTCQNLTQRYLIGDTVEFFLPAIFSWAGGSLPNTSTERKCSRMQ 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02120 121 CDD Bbox1_BBX-like 35 76 - -
Bva07g02120 121 Pfam B-box zinc finger 34 71 IPR000315 GO:0008270
Bva07g02120 121 ProSiteProfiles Zinc finger B-box type profile. 30 76 IPR000315 GO:0008270
Bva07g02120 121 PANTHER B-BOX ZINC FINGER PROTEIN 29 19 101 - -
Bva07g02120 121 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 19 101 - -
Bva07g02120 121 SMART bboxneu5 30 76 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02120 Bva-Chr7 17984047 17984412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02120 13 114 C2C2-CO-like Transcription Factor Family AT3G21890 45.045 1.97e-24 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva07g02120 zf-B_box 1.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02120 - - gmx:100500322 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00517 09 2738448 2738831 Bva07g02120 07 17984047 17984412 BWGD
Bva07g02120 07 17984047 17984412 Bva07g02120 07 17984047 17984412 ECH