Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02107 ATGAAAGCTGAGTTAAAGTTAAGCACTACGTCCATCTCCCTACAAAACCTTACTTTGTTTAATACATCTCATAATCCTCTTTCAGGAGCACTCAAAGGGTGTCTTGGAAGCCTTGATGGAGCTTGTATTGAGAAACTCTTGCTCCACTGTGCTAGTGCTCTAGAGTGCAACGACGTCACTTTGGCTCAACAAGTCATGTGGGTGCTCAACAACGTTGCTTCCCCTGTCGGTGACACTAACCAAAGGCTCACCTCATGCTTCCTGAGGGCATTAATCTCTAGAGCCTCAAGAGTTTGCCCTGCAACCATGAATTTCAATGGAAGCAGCACCATTCAGAGGAGGTTGATGTCTGTGACCGAGTTAGCTGGGTATGTTGATCTAATTCCTTGGCATAGGTTTGGATTCTCTGCATCAAATAGTGCAATTTTTAAAGCAATTGAAGGGTTTCAAAGGGTgcatattttagattttagcaTCACTCACTGTATGCAGTGGCCTACCCTCATAGATGCCTTGGCTAAGAGGCCAGAAGGACCCCCTTCACTTAGAATCACTGTGCCTTCTTGTAGACCACCTCTCCCTCCTTTGGTTAATATATCAACAGAAGAGGTTGGCCTACGTTTGTGGAATTTCGCCAAGTTCAAGAATGTTCCTTTCGAGTTCAATGTTATAGGAAATAGCACAATTTCATCAACGTCTGCCGAATTAAGTAATGAATTATCTAGCTTTCACTTTGAGATTGAATCTCTGTTAACTCAGTTGAATCCTTCTATGCTAAACCTTATGGAAGATGAAGCTTTGGTAATAAATTGCCAGAATTGGCTACACTTCTTGTCTGATGATCGAGAGGGGGTGTGCCAAAATGCTTCTCTTCGTGATACTTTTCTAAATCTAATCAGAGGTTTTAACCCCAGGATTGTGCTCTTGGTTGATGAGGACTGTGATCTTAGTGCATCAAGTCTCACCTCAAGAATCACCACTTGCTTTAACTATCTATGGATACCCTTTGATGCATTGGAAACCATTTTGCCCAAAGATAGTTGTCTGATGGTAGAATATGAATCTGACATAGGTCAGAAAATAGAGAACATCATTAGCTTTGAAGGGCTTCAAAGAATAGAGAGATTAGAGTCTGGCACAAAAATGTCCCAAAGAATGAAAAGTGCTGGTTTCTTCAGTGTTCCATTTTGTGAAGATACTTTAAGGGAGGTTAAGTGTTTGCTTGATGAGCATGCCAGTGGATGGGGAATGAAGAGAGAGGAAGATATGTTGGTTCTCACATGGAAGGGTCACAACTCTGTCTTTGCTACAGCTTGGGTTCCCATTGAAATGAGGGATCATATGGGAGAGGAGTCTATGGACTG 1364 0.4172 MKAELKLSTTSISLQNLTLFNTSHNPLSGALKGCLGSLDGACIEKLLLHCASALECNDVTLAQQVMWVLNNVASPVGDTNQRLTSCFLRALISRASRVCPATMNFNGSSTIQRRLMSVTELAGYVDLIPWHRFGFSASNSAIFKAIEGFQRVHILDFSITHCMQWPTLIDALAKRPEGPPSLRITVPSCRPPLPPLVNISTEEVGLRLWNFAKFKNVPFEFNVIGNSTISSTSAELSNELSSFHFEIESLLTQLNPSMLNLMEDEALVINCQNWLHFLSDDREGVCQNASLRDTFLNLIRGFNPRIVLLVDEDCDLSASSLTSRITTCFNYLWIPFDALETILPKDSCLMVEYESDIGQKIENIISFEGLQRIERLESGTKMSQRMKSAGFFSVPFCEDTLREVKCLLDEHASGWGMKREEDMLVLTWKGHNSVFATAWVPIEMRDHMGEESMD 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02107 454 ProSiteProfiles GRAS family profile. 34 440 IPR005202 -
Bva07g02107 454 Pfam GRAS domain family 44 439 IPR005202 -
Bva07g02107 454 PANTHER OS05G0500600 PROTEIN 2 441 - -
Bva07g02107 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 441 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02107 Bva-Chr7 17925279 17926643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02107 19 442 GRAS Transcription Factor Family AT3G49950 45.602 6.91e-124 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva07g02107 GRAS 7.1e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02107 - - gmx:100802093 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02107 07 17925279 17926643 Bva07g02107 07 17925279 17926643 ECH