Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02102 ACATCTTCGGAGCCCACGCTCGGAACTGGCCCGGTGAAAGAGATGCACAAACCAGAGAGAACCCATACTAAAGGGGATGCTTCCAGGTCCCTGGCTGAGACATTGGAAAGATGGAAGGAGTATAATGCTCGGCTTGAATCTGGCAATGATGGGGATAAGCCAATTCGTAAAGTTCCTGCCAAGGGATCAAAGAAGGGATGCATGAAAGGGAAAGGAGGTCCTGAGAACTCACGTTGTAACTACAGAGGTGTTAGGCAAAGGACTTGGGGCAAGTGGGTTGCCGAAATTCGGGAGCCAAACAGAGGGAATAGGCTTTGGTTGGGTACATTTCCTACAGCAATTGGAGCTGCTCTTGCCTATGATGAGGCAGCAAGGGCATTGTATGGTTCATGTGCCCGACTCAACTTTCCCAATATTTCAGTTTCCAATTTCTCTAAAGAATCGTCAAAACAGTCTCCAGATGCAAATCGGTTTGGTTCTGAAATAGCAACCTCAGGACATTCCGAGTCCGCGATAACACCAAACAACTCTGGATGTTGTGGAGCCGAGAATATCGACACGAAGCACGTTTCTTCAAATGTAAAGCACGAGGAAGGGGAAGGTGATTCAAGTATCAACTTCTCACCTACTTCATTGTCATGATGTATATTTTGAACATTCCGATCCGAATGTGTCTAGAAAGTTTAGCCTTTGTACTTGCAGGTGATTCGACATAGGatgaatgaattttgaaaattgtaaCTGGAAATAGATGTTGTAATATGTACTggggTGAGACGAGACTTGACAGCTCTGGTCCTTCtgtgtttgataaaatgatgatgtttttcttttcggaTCCCCTCTCTACGAGTTCTGCTGTTGCTGAGTGGCCAGGTTA 880 0.4318 TSSEPTLGTGPVKEMHKPERTHTKGDASRSLAETLERWKEYNARLESGNDGDKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGNRLWLGTFPTAIGAALAYDEAARALYGSCARLNFPNISVSNFSKESSKQSPDANRFGSEIATSGHSESAITPNNSGCCGAENIDTKHVSSNVKHEEGEGDSSINFSPTSLSCIFTFRSECVKVPLYLQVIRHRMNEFKLLEIDVVICTGVRRDLTALVLLCLIKCFSFRIPSLRVLLLLSGQ 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02102 284 ProSiteProfiles AP2/ERF domain profile. 80 137 IPR001471 GO:0003700|GO:0006355
Bva07g02102 284 MobiDBLite consensus disorder prediction 43 59 - -
Bva07g02102 284 CDD AP2 79 138 IPR001471 GO:0003700|GO:0006355
Bva07g02102 284 MobiDBLite consensus disorder prediction 13 31 - -
Bva07g02102 284 MobiDBLite consensus disorder prediction 1 31 - -
Bva07g02102 284 MobiDBLite consensus disorder prediction 144 176 - -
Bva07g02102 284 MobiDBLite consensus disorder prediction 43 79 - -
Bva07g02102 284 SUPERFAMILY DNA-binding domain 80 137 IPR016177 GO:0003677
Bva07g02102 284 PRINTS Ethylene responsive element binding protein signature 103 119 IPR001471 GO:0003700|GO:0006355
Bva07g02102 284 PRINTS Ethylene responsive element binding protein signature 81 92 IPR001471 GO:0003700|GO:0006355
Bva07g02102 284 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 19 194 - -
Bva07g02102 284 SMART rav1_2 80 143 IPR001471 GO:0003700|GO:0006355
Bva07g02102 284 Gene3D AP2/ERF domain 80 139 IPR036955 GO:0003700|GO:0006355
Bva07g02102 284 Pfam AP2 domain 79 129 IPR001471 GO:0003700|GO:0006355
Bva07g02102 284 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 19 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02102 Bva-Chr7 17899739 17902225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02102 24 137 AP2-EREBP Transcription Factor Family AT2G40350 62.712 1.89e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva07g02102 AP2 1.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02102 - - gmx:100499747 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00536 09 2867843 2869990 Bva07g02102 07 17899739 17902225 BWGD