Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02092 ATGAAGAACTGCGAGCTGTGCAAGCTTCCGGCGAGTACCTTCTGCGAGTCGGACCAGGCAAGCTTATGCTGGGACTGCGACGCCAAGGTTCATGGAGCTAATTTCTTAGTAGCTAGGCACTCGAGGGCTCTTCTATGTCACGAGTGCCAATCTCCGACGCCGTGGAAAGCTTCCGGTGCTAAGCTCGGGAACACTGTTTCGGTTTGCGAGAGTTGCGCTGGTGGAATGAAAGCTAACggtgaaagaagagaagaaagcgAAGGAAACATTGACGACGAGATAGACACGGAGGACGACCTCGATGACGATGACTACGACGACTATAGCGTGGCTGGCGAGGACGACGATGCGGTTGGCGGTGATGAAGACGGAGATAATCAAGTAGTCCCTTGGTCTTCGACGCCACCTCCACCTGCTGCAAGTTACTCGAGTAGCGAAGAGTCTGCTAGCAGACATAATAACAGCGGTATAGATACTTCTGAAACAGCGACCATGATTTCGTTGAAGCGGAGGCGCGAGAGTGCATCAGATCTTAATTTCCAgGATGGTTTCAACAGTTCGTCTTCTCAAAAGAGATACGGTACGGATTTGACGGTGAAGGAAGCTTCGTTACCGTGCGACTTCGAAGGGTCATCTATGGAGGCGGGGCCCTTGAAAGACGGAGAGAGTAGCAGAGCGGCGTCACATTCCGATTTCACAAATAAATCGATAGAGATGTTTAACGGGTCACGCAGCGGCAGGGATGGTAAATACATCTG 758 0.5 MKNCELCKLPASTFCESDQASLCWDCDAKVHGANFLVARHSRALLCHECQSPTPWKASGAKLGNTVSVCESCAGGMKANGERREESEGNIDDEIDTEDDLDDDDYDDYSVAGEDDDAVGGDEDGDNQVVPWSSTPPPPAASYSSSEESASRHNNSGIDTSETATMISLKRRRESASDLNFQDGFNSSSSQKRYGTDLTVKEASLPCDFEGSSMEAGPLKDGESSRAASHSDFTNKSIEMFNGSRSGRDGKYI 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02092 252 PANTHER - 1 201 - -
Bva07g02092 252 Pfam B-box zinc finger 2 40 IPR000315 GO:0008270
Bva07g02092 252 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Bva07g02092 252 SMART bboxneu5 1 45 IPR000315 GO:0008270
Bva07g02092 252 CDD Bbox1_BBX-like 4 45 - -
Bva07g02092 252 MobiDBLite consensus disorder prediction 77 192 - -
Bva07g02092 252 MobiDBLite consensus disorder prediction 90 122 - -
Bva07g02092 252 MobiDBLite consensus disorder prediction 138 164 - -
Bva07g02092 252 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 201 - -
Bva07g02092 252 MobiDBLite consensus disorder prediction 178 192 - -
Bva07g02092 252 MobiDBLite consensus disorder prediction 207 252 - -
Bva07g02092 252 MobiDBLite consensus disorder prediction 227 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02092 Bva-Chr7 17853195 17854334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02092 2 138 C2C2-CO-like Transcription Factor Family AT4G27310 47.826 7.40e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva07g02092 zf-B_box 7.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02092 - - vvi:100252747 196.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00543 09 2896157 2897296 Bva07g02092 07 17853195 17854334 BWGD
Bva07g02092 07 17853195 17854334 Bva07g02092 07 17853195 17854334 ECH