Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02089 ATGGACAACGTGAAGATATCATGGTTCTGGCTTTCTGTTCTCATCCTCTGCTTCTCGCTTTATGCCCACCCCTCCCTCGGAGCAGACAAGATCACCTCAAATCAATCTCTTTCTGGTGATCAAACTATTGTATCTGCCTGTGGGATCTTTAGATTGGGTTTCTTCAAACCAAGTAACTCCTCAAACTACTACGTGGGCATGTGGTACAACAAGGTCTCTGTACAGACCATTGTTTGGGTAGCAAACAGAGATACACCAGTCTCTGATACAACAGCTGCAAAGTTAACAATATCGGGTGGTAATTTAGTTCTCTTCAACGAGTCTCAAATGCCTGTTTGGTCAACAAATTTGAATTCTGCCAGTTCAAGTTCCGTAGAAGCTGTCCTTCTAGATAGTGGGAATCTTGTTTTACGACAGGATACATCATCAGAATTTTTGTGGCAGAGTTTTGATCATCCAACACATACATGGCTTCCGGGGGGGAAACTTAAGCTGGATACTAGGACAAAACAGCCAAATTATCTTACTTCGTGGAAGAATAGTGAGAATCCTGCACCAGGCCTCTTCTCCCTGGAACTAGACCCAAAGGAGACCACttcatatttaattctttGGAACAAGTCTCAACAGTATTGGAGTAGTGGTCGTTGGAATGGCCAAATTTTCAGCGAGGTTCCTGAAATGATGGGTAATCGTCTGTACAATACTACTTTTGTATCGGACAGTAATGAGAGTTATTTCACCTACAACATGTATAATACGTCAATCATGTCTCGATTTGTGATGGATGTCTCGGGGAAGATCAAGCAATTCATATGGTCAGAAGCTTCCGAGCAATGGACTCTAATTTGGTCACAGCCAAGACGACAATGTGAGGTTTATGATCTCTGTGGGGCATTTGGCAGCTGCGATGAGAATTCCTTGACATTCTGCAATTGCTTGACTGGCTTTGAGCCAAAGTTACAAAATGATTGGAACTTGAACGACTACTCGGGTGGTTGTCAGAGGAAAACCCAGTTGCAATGTGAGAGTTCTAACCCCTCTAGTGGGAAGAATGATAGGTTTCTAGCAATGTCCAACATGAAATTGCCCCAACATTCACAATCTGTGGGCGTAGGGAATGCAGGGGAATGTGAGACGACCTGTTTAAGTAATTGCTCCTGCACTGCTTATGCATATGACAGCAATGGCTGCTCAATTTGGAGTGGAGACCTCTTGAATCTGCAACAATCTTCTCAAGATGATAGCAGCGGAAAAACTCTGTATCTCAAACTTGCGGCTTCTGAGTTTTCCGATTCTAAAGGTAACAAGAGGATAGTTATTGGTATTGTTGTGGGTGCGGTTGTTGTTGTAGGGGTACTCCTCGCCATTTTTGTGTTTCCAATGCTCAGGAGaaggaggagaaaaaaagCAACAGGTTTGGAGGGTACCTTAATGGTATTTGGGTACAGGGATTTGCGAAATGCAACCAAGAATTTCTCGGAGAAATTGGGCAGAGGAGGTTTTGGTTCTGTTTTCAAAGGAACCTTACCAGATTCAAGTGTTATAGCAGTGAAGAAGCTTGAAAGCGTCGGCCAAGGTGAGAAGCAGTTCAGAGCAGAAGTAATTACAATTGGCACAGTCCAACATGTTAATCTTGTCCGGCTTCGCGGTTTCTGCTCTGAAGGTACTAAAAAGCTGCTGGTGTATGATTACATGCCAAACAGCTCCTTAGATTCCCATTTATTCCGTCAAAAGAACCCCAACGTATTGGATTGGGAGCTGAGATATCAAATTGCTCTAGGAACAGCGAGGGGGTTGAATTATCTCCACGATAAGTGCAGAGATTGTATCATACATTGTGACATAAAACCCGAGAACATTCTTTTAGATGCTGATTTTCGTCCAAAAGTGGCAGACTTTGGTATGGCAAAGCTAGTTGGAAGGGATTTCAGCAGAGTCCTCACAAACATGAGAGGAACAAGAGGTTATCTTGCTCCAGAGTGGCTTTCTGGATTGGCCATCACCAGCAAAGCTGATGTTTACAGCTACGGAATGATGCTTTTTGAATTAGTATCAGGCAGGAGGAACAGTGAGCTATCTGAAGATGGCCAAGTGAAGTTCTTTCCTGCTTTGGCAGCAAATATAGTAAGCCAAGGAGGTGATGTTGTTAGCGTGTTAGACCCAAGGTTGAATGGAAATGCCGACATAGAGGAGCTTACTCGAATGATAAAAGTTGCTTCATGGTGTACTCAAGATGAAGAAGCTCACAGGCCAGCCATGGGTCAGGTAGTTCAAATGCTTGAAGGTGTCTTGGATGTGAATTTGCCTCCAGTTCCACGAGCCCTCCAAATATTTGTTCATAACCAGCAGAATAGGGTCTTCTTCACTGATTCAAACTCCGCCCAGTCTCAAGCCATAAGCAACATCTCTTCATCAAGCTCCAAGTCTTG 2432 0.4326 MDNVKISWFWLSVLILCFSLYAHPSLGADKITSNQSLSGDQTIVSACGIFRLGFFKPSNSSNYYVGMWYNKVSVQTIVWVANRDTPVSDTTAAKLTISGGNLVLFNESQMPVWSTNLNSASSSSVEAVLLDSGNLVLRQDTSSEFLWQSFDHPTHTWLPGGKLKLDTRTKQPNYLTSWKNSENPAPGLFSLELDPKETTSYLILWNKSQQYWSSGRWNGQIFSEVPEMMGNRLYNTTFVSDSNESYFTYNMYNTSIMSRFVMDVSGKIKQFIWSEASEQWTLIWSQPRRQCEVYDLCGAFGSCDENSLTFCNCLTGFEPKLQNDWNLNDYSGGCQRKTQLQCESSNPSSGKNDRFLAMSNMKLPQHSQSVGVGNAGECETTCLSNCSCTAYAYDSNGCSIWSGDLLNLQQSSQDDSSGKTLYLKLAASEFSDSKGNKRIVIGIVVGAVVVVGVLLAIFVFPMLRRRRRKKATGLEGTLMVFGYRDLRNATKNFSEKLGRGGFGSVFKGTLPDSSVIAVKKLESVGQGEKQFRAEVITIGTVQHVNLVRLRGFCSEGTKKLLVYDYMPNSSLDSHLFRQKNPNVLDWELRYQIALGTARGLNYLHDKCRDCIIHCDIKPENILLDADFRPKVADFGMAKLVGRDFSRVLTNMRGTRGYLAPEWLSGLAITSKADVYSYGMMLFELVSGRRNSELSEDGQVKFFPALAANIVSQGGDVVSVLDPRLNGNADIEELTRMIKVASWCTQDEEAHRPAMGQVVQMLEGVLDVNLPPVPRALQIFVHNQQNRVFFTDSNSAQSQAISNISSSSSKS 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02089 810 Pfam S-locus glycoprotein domain 212 320 IPR000858 GO:0048544
Bva07g02089 810 Pfam Protein kinase domain 494 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02089 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Bva07g02089 810 CDD PAN_AP_plant 338 426 - -
Bva07g02089 810 ProSitePatterns Protein kinases ATP-binding region signature. 497 520 IPR017441 GO:0005524
Bva07g02089 810 CDD B_lectin 34 153 IPR001480 -
Bva07g02089 810 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Bva07g02089 810 CDD STKc_IRAK 497 763 - -
Bva07g02089 810 SUPERFAMILY Protein kinase-like (PK-like) 477 799 IPR011009 -
Bva07g02089 810 Pfam D-mannose binding lectin 76 179 IPR001480 -
Bva07g02089 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 218 IPR036426 -
Bva07g02089 810 Gene3D Transferase(Phosphotransferase) domain 1 566 769 - -
Bva07g02089 810 ProSiteProfiles Protein kinase domain profile. 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02089 810 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 7 790 - -
Bva07g02089 810 SMART serkin_6 491 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02089 810 Gene3D - 25 151 IPR036426 -
Bva07g02089 810 PIRSF SRK 2 810 IPR024171 GO:0004674
Bva07g02089 810 ProSiteProfiles Bulb-type lectin domain profile. 28 150 IPR001480 -
Bva07g02089 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 7 790 - -
Bva07g02089 810 Gene3D Phosphorylase Kinase; domain 1 458 565 - -
Bva07g02089 810 SMART ntp_6 350 425 IPR003609 -
Bva07g02089 810 SMART blect_4 34 153 IPR001480 -
Bva07g02089 810 Pfam PAN-like domain 350 407 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02089 Bva-Chr7 17836928 17839510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02089 481 771 Receptor kinase-like Gene Family AT5G20050 45.928 2.03e-80 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva07g02089 Pkinase 9.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02089 - - gmx:100305421 1129.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02089 07 17836928 17839510 Bva07g02089 07 17836928 17839510 ECH