Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02087 ATGAGAAGGCCATGTGGACTGAAAAAAGGAAGATGGACGCCGGAGGAAGATGGTAAATTGATTGCCTATGTCAGTAGGTATGGCCACTGGAATTGGAGTCTGCTCCCCCATTTTGCAGGTCTTGCAAGGTGTGGGAAGAGTTGCAGGTTGAGATGGATGAATTATCTTAGACCCAATATCAAAAGAGGGAACTACACTGAAGAAGAGGACGATATTATCATCAAACTGCATGAGAAGCTTGGTAATAGATGGTCCGTGATTGCCGGTCACCTACCAGGAAGATCAGATAACGAGATAAAAAATCACTGGCACTCGACTCTTAAGAAGAGCTTCCCACAGAATTCAGTTTCGGCGGAAAAAACTGATTTGAAAAATAACCCAGCTACTTCTCAGGTCTCCGATGCTTCCCCTCAGACATCGTCCGGTGAATTCTCCTCTTGCATAAGCATATCTGCAGAGACCCTCGCAGCTACTAATGAAAATGCAATCATAGAGTacgattttgatttttcagatGAATTTACAAGTGTAAATTTCTGGCTAGAGCCATATATGGCTGACATTTCCTACGTCCCAAATGAAATATTGGTACCCATGGCGGCTGAACCCGAATATTCATATCCACTGCTGTATGCAGATGCACAACTTTGGAGCGAAGATAACTTGTACCAGTATACTGGCTTATTCTA 689 0.4253 MRRPCGLKKGRWTPEEDGKLIAYVSRYGHWNWSLLPHFAGLARCGKSCRLRWMNYLRPNIKRGNYTEEEDDIIIKLHEKLGNRWSVIAGHLPGRSDNEIKNHWHSTLKKSFPQNSVSAEKTDLKNNPATSQVSDASPQTSSGEFSSCISISAETLAATNENAIIEYDFDFSDEFTSVNFWLEPYMADISYVPNEILVPMAAEPEYSYPLLYADAQLWSEDNLYQYTGLF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02087 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 56 IPR017930 -
Bva07g02087 229 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Bva07g02087 229 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
Bva07g02087 229 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 5 164 - -
Bva07g02087 229 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Bva07g02087 229 SMART sant 8 58 IPR001005 -
Bva07g02087 229 SMART sant 61 109 IPR001005 -
Bva07g02087 229 CDD SANT 64 107 IPR001005 -
Bva07g02087 229 CDD SANT 11 56 IPR001005 -
Bva07g02087 229 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 5 164 - -
Bva07g02087 229 MobiDBLite consensus disorder prediction 114 142 - -
Bva07g02087 229 Pfam Myb-like DNA-binding domain 62 105 IPR001005 -
Bva07g02087 229 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Bva07g02087 229 Gene3D - 8 61 - -
Bva07g02087 229 ProSiteProfiles Myb-like domain profile. 7 56 IPR001005 -
Bva07g02087 229 Gene3D - 63 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02087 Bva-Chr7 17827125 17828511 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02087 2 167 MYB Transcription Factor Family AT2G31180 48.333 1.52e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g02087 Myb_DNA-binding 5.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02087 K09422 - gmx:100777621 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02087 07 17827125 17828511 Bva07g02087 07 17827125 17828511 ECH