Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02086 atggTAAGAACTCCTTACCGTGACAAAAGCGGACTACAGAAAGGAACATGGACACCAGAAGAAGACAGGAAATTGATAGATTATGTTACTAGGTATGGCTGTTGGAATTGGCGACAACTTCCCAGATTTGCTGGTCTTGCAAGGTGTGGAAAGAGTTGCAGACTGAGGTGGATGAATTATCTAAGGCCAGACGTCAAAAGAGGGAACTTCACagcacaagaagaagaaactattATCAAACTCCACGCAAAGCTGGGGAATAGATGGTCTGCGATTGCTGCTGAGTTACCTGGAAGAACagacaatgaaataaaaaattactggCACACAAACCTGGAGAAGCGCACTGAACAGCATTCAGCCACACATGAAAAAGCTAAAGTTTCCAAGTCAAAGAATCACTCCACAATTAAATCTAGGCAAAAGAGAGACTCAGTGCCAGTGATTAACACTGAAGCGTCTCATGGCACTCCACCTACCTCATCACAGCCATCGGCGAGTGAATCATCCTGCATAACTAGAGAGACCACAGCTGCCAGTGACGAATATTTGGTTCTGGAACAAGATGGCTTTACATTTTTGGATACCTATAACATAGAGCCTGAAATTGCAAATGTCTGGACAGAGCCATATACGGCTgacttttcctttgtcccaaatgaaatatttacaCCCTTGCTGACTGAACCTGAATATCCATATTCAATATATGATTCAGAACTTTGGGGTCGCGAATA 737 0.3935 MVRTPYRDKSGLQKGTWTPEEDRKLIDYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYLRPDVKRGNFTAQEEETIIKLHAKLGNRWSAIAAELPGRTDNEIKNYWHTNLEKRTEQHSATHEKAKVSKSKNHSTIKSRQKRDSVPVINTEASHGTPPTSSQPSASESSCITRETTAASDEYLVLEQDGFTFLDTYNIEPEIANVWTEPYTADFSFVPNEIFTPLLTEPEYPYSIYDSELWGRE 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02086 245 CDD SANT 69 112 IPR001005 -
Bva07g02086 245 CDD SANT 16 61 IPR001005 -
Bva07g02086 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva07g02086 245 Gene3D - 14 66 - -
Bva07g02086 245 MobiDBLite consensus disorder prediction 115 173 - -
Bva07g02086 245 MobiDBLite consensus disorder prediction 115 131 - -
Bva07g02086 245 Gene3D - 69 145 - -
Bva07g02086 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva07g02086 245 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bva07g02086 245 MobiDBLite consensus disorder prediction 142 173 - -
Bva07g02086 245 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 216 - -
Bva07g02086 245 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 216 - -
Bva07g02086 245 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva07g02086 245 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva07g02086 245 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva07g02086 245 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva07g02086 245 SMART sant 13 63 IPR001005 -
Bva07g02086 245 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02086 Bva-Chr7 17821224 17822592 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02086 1 119 MYB Transcription Factor Family AT2G31180 68.908 6.35e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g02086 Myb_DNA-binding 3.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02086 K09422 - gmx:100777107 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02086 07 17821224 17822592 Bva09g00552 09 2939865 2941219 BWGD