Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02085 ATGGTGAGAACCCCTTCGAGAGATAAAAGTGGACTGAAGAAAGGAACATGGACACCAGAAGAAGACAGAAAGCTAATTGCCTATGTTACGAGGTATGGCTGCTGGAATTGGCGCCAACTTCCCAGATTTGCAGGTTTGGCAAGGTGTGGAAAAAGTTGTAGACTGAGGTGGATGAACTATCTAAGGCCAAACATCAAAAGAGGAAACTATAGTCCAGAAGAAGAAGCCATCATCATCAGACTTCATGCTGAACTGGGCaacagATGGTCTGCAATTGCTGCTCAATTGCCAGGGAGAACtgataatgaaattaaaaatcattggCACACCAGTCTCAAGAAGCGAGTTCAGCAGGACTCAGTTGCCCATGAAAAATCTCAAGTGTCCAAGTCAAAGGACCAATCCCCAATTGAATCCAGAGACAATGGTCACTTCCAAGAAAGTTCAGCTACTTCCCCGATCTCCGATTCTTGGACATTAATGTCTCCATCGTCGAGTGAAATCTCCAGCATAACTACAGAGACCACAGCTGCCAGTAGCCAAAATTTGTGGCTGGAAGGAGAACTTGCCTTTCTAGAAGCATACACAGAACCTATGACTGAAAATTTCTGGACAGAGCCATATACGTTCGACGTTTCCGATATTCAAAGTGAAAATTTCTGGACTGAGCCTTTCCAAAGTCCAGCCAGTCCCCAGATCCCTGATGTCTGCCCACTGTCCCCGCAGCCATCTTCAAGCGGAAGTTTAGTCCCGGAAGATGAATTTGCTTTTGTGGATGCATCAACAGAGCCTATGATTGATAATTTCTGGACAGATCCATTTATGACTGATCTTTCCCAAGTCCCAAGTGAAATGTTCACTCCCTTGGTGACTCAACAAGAATATCCGAGTCCATTGCGTGACGAACAACTGTGGAACCAAAACATTTTGTATGAGGAATATATTGGCTTATTTCAATG 959 0.4348 MVRTPSRDKSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYLRPNIKRGNYSPEEEAIIIRLHAELGNRWSAIAAQLPGRTDNEIKNHWHTSLKKRVQQDSVAHEKSQVSKSKDQSPIESRDNGHFQESSATSPISDSWTLMSPSSSEISSITTETTAASSQNLWLEGELAFLEAYTEPMTENFWTEPYTFDVSDIQSENFWTEPFQSPASPQIPDVCPLSPQPSSSGSLVPEDEFAFVDASTEPMIDNFWTDPFMTDLSQVPSEMFTPLVTQQEYPSPLRDEQLWNQNILYEEYIGLFQ 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02085 319 CDD SANT 69 112 IPR001005 -
Bva07g02085 319 MobiDBLite consensus disorder prediction 115 140 - -
Bva07g02085 319 CDD SANT 16 61 IPR001005 -
Bva07g02085 319 Gene3D - 69 142 - -
Bva07g02085 319 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva07g02085 319 Gene3D - 6 67 - -
Bva07g02085 319 SMART sant 66 114 IPR001005 -
Bva07g02085 319 SMART sant 13 63 IPR001005 -
Bva07g02085 319 MobiDBLite consensus disorder prediction 141 163 - -
Bva07g02085 319 MobiDBLite consensus disorder prediction 115 163 - -
Bva07g02085 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva07g02085 319 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva07g02085 319 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva07g02085 319 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Bva07g02085 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva07g02085 319 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 230 - -
Bva07g02085 319 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva07g02085 319 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02085 Bva-Chr7 17814978 17816470 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02085 1 214 MYB Transcription Factor Family AT2G31180 46.262 9.67e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g02085 Myb_DNA-binding 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02085 K09422 - gmx:100777107 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02085 07 17814978 17816470 Bva07g02085 07 17814978 17816470 ECH