Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02084 ATGGTGAGAGCTCCTTTCTATGACAAAAATGGAGTGAAGAAAGGAGCATGGAGCAGAGAAGAAGATGAGAAGTTAAGGGATCATATTGAAAGGCATGGCCATCCTAATTGGCGTAAACTCCCCAAGCTTGCAGGATTATCAAGGTGTGGAAAAAGTTGCAGACTTCGTTGGATGAATTACCTGCGGCCAAATCTAAAACACGGGAGCTACaccaaagaagaagaggaaataaTCGTTGAACTACATCAACAGCTGGGGAATAAATGGTCCCTCATTGCTGAAAGATTACCCGGAAGGACAGACAACGAGATCAAAAACCACTGGCACAGCCACCTAAGCAAACGCAATAATACAAGGAGATTCGAGATCCAAGTGAACCCCATTGATGCTTCTGAACAAGAAATAACTTCGTATGCAGAATCCCATGAAAATCAAAGGATTATTGTTTCTGATGATCGCTCCACGAATGTTTCAGAAAGCTCATCGACCATGTCCACAGAGACATCTTATACCCAAGAAAATTACTCTCCTTCCCTTACCTCTAATCATGTGCAATCAACCAGCATATCAGAAGAAGACAGCGTTGCCTCGTGGGGAACACTAGAAGGATTGGGCTCTGACTTTTGGACGGAACCATTTATATCAGATAATGTTTCATATGGTCACTGTATTTATCGGGCAGACCCAGGAGAGATTGCCTACTACTATGACGGTACAGATTTGTTGTACCAAGTAATGGGAGAGTACCAATTAAGTTA 758 0.4169 MVRAPFYDKNGVKKGAWSREEDEKLRDHIERHGHPNWRKLPKLAGLSRCGKSCRLRWMNYLRPNLKHGSYTKEEEEIIVELHQQLGNKWSLIAERLPGRTDNEIKNHWHSHLSKRNNTRRFEIQVNPIDASEQEITSYAESHENQRIIVSDDRSTNVSESSSTMSTETSYTQENYSPSLTSNHVQSTSISEEDSVASWGTLEGLGSDFWTEPFISDNVSYGHCIYRADPGEIAYYYDGTDLLYQVMGEYQLS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02084 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva07g02084 252 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva07g02084 252 CDD SANT 69 112 IPR001005 -
Bva07g02084 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva07g02084 252 CDD SANT 16 61 IPR001005 -
Bva07g02084 252 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva07g02084 252 Gene3D - 69 115 - -
Bva07g02084 252 SMART sant 66 114 IPR001005 -
Bva07g02084 252 SMART sant 13 63 IPR001005 -
Bva07g02084 252 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva07g02084 252 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bva07g02084 252 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 218 - -
Bva07g02084 252 MobiDBLite consensus disorder prediction 149 182 - -
Bva07g02084 252 Gene3D - 7 67 - -
Bva07g02084 252 PANTHER MYB TRANSCRIPTION FACTOR 1 218 - -
Bva07g02084 252 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02084 Bva-Chr7 17804097 17805291 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02084 1 128 MYB Transcription Factor Family AT5G16770 60.156 6.56e-55 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g02084 Myb_DNA-binding 2.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02084 K09422 - gmx:100782270 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00553 09 2946770 2948261 Bva07g02084 07 17804097 17805291 BWGD