Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02080 ATGGGAAGAGCACCTTGCTGTGATAAAAAAGGACTCAAGAAAGGTCCATGGACACCTGAGGAAGATCTTCAGCTCATCAATTATATCCAAGCTCATGGGCCAGGCAATTGGCGAAACCTCCCCGAGAATGCTGGTCTGCAAAGATGTGGCAAGAGTTGCCGCCTTCGATGGACTAATTATCTGAGACCCGATATCAAGAGGGGAAGATTCTcctttgaagaagaagaaacgaTCATTCAATTGCACAGTGTCTTGGGGAATAAATGGTCGGCTATTGCTGCTCGCTTGCCTGGAAGAACTgacaatgaaataaagaattacTGGAACACCCACATTAGGAAGAGGCTGCTTCGGATGGGAATTGACCCAGTTACTCATGCCCCAAGGCTTGATCTACTTGACATATCTTCGATTCTGAGATCAGCTTTTTGTAACCAATCGCTTCTAAATCTGCAAGGCTTTTTGAGTGCCCAAGCATTGATGAACCCAGAATTGTTGAAGCTGGCTACTACTCTGTTATCTTTGAACAATGAAAACCCAGATTTGGTTTCACAGAATCTACAACAAATCCAAGCTATGAATCCTCAAGTACAAAGCCAAGTTACCCCGCAAATGCAATTTAGTCAGTTTCAGATGCCAATCCAAAACAATGTAGAACATTTCTCCGgtgatttgaaaaatatggGCTGTTCAAATTCACAAGAGAATTCAGTTCCTTCCTGTCTGGCTGAGAACCTAATGGCGCAGGCAAGCCAAGCTGATTTGCTGGGAAACCCAATTTTCGTGGATTCTCGAAACAATACAAACCAAAACTTGGGCTATGACTCTGTTCTATCTACGCCTTTGTCGAGTCCAACTCCATTGAATTCATCATCCACTTATGTGAATAGCAGCACAGAAGAGGAGAAAGATAGCTCTTGCAGCGACTGGTTCAAGTTCGAAATTCCTGAGAGTCTGGATATTAGTGATTTCTTGTA 977 0.4125 MGRAPCCDKKGLKKGPWTPEEDLQLINYIQAHGPGNWRNLPENAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDISSILRSAFCNQSLLNLQGFLSAQALMNPELLKLATTLLSLNNENPDLVSQNLQQIQAMNPQVQSQVTPQMQFSQFQMPIQNNVEHFSGDLKNMGCSNSQENSVPSCLAENLMAQASQADLLGNPIFVDSRNNTNQNLGYDSVLSTPLSSPTPLNSSSTYVNSSTEEEKDSSCSDWFKFEIPESLDISDFL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02080 325 SMART sant 66 114 IPR001005 -
Bva07g02080 325 SMART sant 13 63 IPR001005 -
Bva07g02080 325 CDD SANT 69 112 IPR001005 -
Bva07g02080 325 CDD SANT 16 61 IPR001005 -
Bva07g02080 325 PANTHER TRANSCRIPTION FACTOR MYB41 1 320 - -
Bva07g02080 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bva07g02080 325 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva07g02080 325 Gene3D - 13 66 - -
Bva07g02080 325 MobiDBLite consensus disorder prediction 279 300 - -
Bva07g02080 325 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva07g02080 325 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 320 - -
Bva07g02080 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bva07g02080 325 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva07g02080 325 Gene3D - 69 116 - -
Bva07g02080 325 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva07g02080 325 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02080 Bva-Chr7 17774013 17775178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02080 1 325 MYB Transcription Factor Family AT4G21440 50.700 2.77e-105 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva07g02080 Myb_DNA-binding 5.3e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00559 09 2984786 2986091 Bva07g02080 07 17774013 17775178 BWGD
Bva07g02080 07 17774013 17775178 Bva07g02080 07 17774013 17775178 ECH