Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02042 ATGGGGTGTTGTGTCTCAACTAGCAGCAAGAGTTCTTGTAGCAGCAGGAGCAATGGCGAGACATTGTCTCCACGGTGTTTGGGAATTGGATTCTGTGGGCAAAAGAGTTCAAGGAAAACATTCTCAGATCATGTTATTTCCCTGCACCATTTACCATCCTTACCAAACAGAATTTTCAGCAATGGAAAGAGCAGGAGTTCTTGCATATTTACACAGCAAGGTCGAAAGGGTATCAACCAGGATGCCATGATTGTTTGGGAAGATTTCATGTCAGAAGATGTGATTTTTTGTGGTGTCTTTGATGGCCATGGTCCTCATGGTCATCTTGTTGCACGCAAAGTGAGGGATGCCTTGCCTGTAAAATTGCTTTCGTTTTTGCATTCTTGTGAATCGAGGCAAAATGGGTCAGGTAGAGCTTGCTTCAAAGGGAATGTGAAATCTGATGGTGGAGAATTGGACAATGATTGTTCTGCTGAGGATAAACTCAACTCTATATGGAGAGAATCTTTCATGAAAGCATACAAGGCTATGGACAAAGAGCTAAGGTCTCACCCAAATTTGGACTGCTTCTGTAGTGGGAGCACCGCTGTAACAATAGTGAAGCAGgGTTCAAATCTGTTCATGAGCAACATTGGGGATTCCCGAGCAATAATGGGATCCAAGAACAGTGATGATGGTTCCATGGTGGCAATTCAGTTGACTGTTGACTTGAAGCCTGATTTGCCAAgggaagcagaaagaattaaaCGGTGCAAAGGTAGGGTATTTGCTTTGCAAGATGAGCCCGAAGTGCCCAGGGTATGGTTGCCCTTTGACGATGCACCTGGATTAGCAATGGCCCGAGCATTTGGTGATTTCTGCTTGAAGGAGTATGGCGTGATTTCTATACCTGAATTCTCTCATCGTCTGCTTACAGACAAAGATCAGTTCATTGTTCTTGCATCAGATGGGGTTTGGGATGTGTTAAGCAATGAGGAGGTGGTTGAAATAGTATGTACAGCGCCAACGCGGTCGTCGGCAGCAAGGATTCTGGTGGATTCTGCTGCTCGAGAATGGAAACTGAAATATCCAACTTCAAAGATGGATGACTGTGCTGTTGTATGCCTATTTTTGGACGGGAAAATGGACTCGGAATCTGATTACGACGAACAAGGCTTTTCTTCTGCTACAATCCAGAGTAACCATTCAGGTAATCCAATTGAATCAGACGACGGTCAAAAGTCAGAGCCATCTCTGCAGAGGAACTTCACTGTGAGATCCTCGGAAGAAGGTGAGACTTACGGAGGAGTAGCTGTTGATGTTGAAGATGGAACATCACCGCCCGATGATCAAAACTGGTCTGGTTTGGAAGGTGTCACCCGTGTAAACTCACTGGTCCAACTTCCTAGATTTTCTGAGGAAAGGCCAAACCCTTG 1415 0.4445 MGCCVSTSSKSSCSSRSNGETLSPRCLGIGFCGQKSSRKTFSDHVISLHHLPSLPNRIFSNGKSRSSCIFTQQGRKGINQDAMIVWEDFMSEDVIFCGVFDGHGPHGHLVARKVRDALPVKLLSFLHSCESRQNGSGRACFKGNVKSDGGELDNDCSAEDKLNSIWRESFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMSNIGDSRAIMGSKNSDDGSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRLLTDKDQFIVLASDGVWDVLSNEEVVEIVCTAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEEGETYGGVAVDVEDGTSPPDDQNWSGLEGVTRVNSLVQLPRFSEERPNP 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02042 471 MobiDBLite consensus disorder prediction 381 452 - -
Bva07g02042 471 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 459 - -
Bva07g02042 471 SUPERFAMILY PP2C-like 57 373 IPR036457 -
Bva07g02042 471 MobiDBLite consensus disorder prediction 1 20 - -
Bva07g02042 471 Pfam Protein phosphatase 2C 94 336 IPR001932 -
Bva07g02042 471 SMART PP2C_4 55 369 IPR001932 -
Bva07g02042 471 CDD PP2Cc 65 371 IPR001932 -
Bva07g02042 471 Gene3D - 57 373 IPR036457 -
Bva07g02042 471 MobiDBLite consensus disorder prediction 382 422 - -
Bva07g02042 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 371 IPR001932 -
Bva07g02042 471 PANTHER ALPHABET, ISOFORM E-RELATED 1 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02042 Bva-Chr7 17625647 17629594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02042 1 469 PP2C-type Phosphatase Gene Family AT1G03590 70.355 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02042 - - gmx:100798340 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00587 09 3117921 3122161 Bva07g02042 07 17625647 17629594 BWGD