Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02031 ATGTCTGCGGCTAAGAACAGTGGCAAATCCAACAAGGGTGCTGATGACACTCGGAAGATCATTCGGATGGAAGAAAGCCAAGATAGGGAAATTGACAAGGGCAAGGATCTAGATTTTAGCTTTCAGAGGCGGCAATGGAAGCCAGTTTTTGATGATGCTTCCGTGTCGCGTAGCCCTCTCAAGAAGATCCGTAGCCCAGAACGTCAAAACCTAAATGCATCATCCTCTGTTTCACTGCAACCTCCTTCTTCCTCATTTACCTCTGCAATCCCTCCTAATGCAGCGTCGTCTCCCAATGTGTGTCCTCCTTCATCGTCTTCCAGAATTGTGTTTCCTTTTGCCTTTGACGGGCCTCAACATCCTCTGCAATTTCCTCAACAATTTGGAACCGCAAATTTGCCTCTGTTTCGTCCACCCATTCAACCGACACAACAAAATCAGCAGCAACAGATGATATCTCTTGGTCCCCAGCAACAAAACATTATGTACCCACAATTCCTTGTCCCACATTCTGCCATGTCCCAGcaacagcaacaacaacagcGGCAGCAGCAGCTTCTCCGGTATTGGAGTGACACCCTGAATCTAAGTCCACGAGGaagaatgatgatgatgaatagGTTAGGGCCGGATGGCAGGCCATTGTATAGGCCACCGTCACAGCCTTTAAATACTACTAAGCTGTACAGGGGAGTGAGGCAACGCCACTGGGGAAAATGGGTGGCTGAAATTCGTCTTCCTCGCAATAGAACTCGCCTCTGGCTAGGCACATTTGATACTGCAGAAGACGCTGCCTTGGCGTATGATCGTGAAGCCTTTAAGTTAAGAGGCGAGAATGCAAGACTCAATTTTCCCGAGCTTTTTCTTAACAAGGATAAAGCGTCGTCAGCTGATCCAAATTCAGCTACTTCTTCTCCCCCAACTCCGAATGAAGGTCAAATTTCCACGTCAAGTCAGAACTCAAAGCAAAGCGAGGCAGTTCAAGAAGGCCTTAACGTGCAGGCTATGAGCACCGAGACGATGCCAACGCCGGCGCTGCCGAAACATGAAGAGAATACTGACAATGATTCGGGATTCGGGTCGAGTGATGCTACTGTGAGCGACGAAGTTCAGGCGGCTGCTGCAAGTGCTGAAACAGGGGAAGACATTTCACAGTCGCAGGAACTGGTATGGGGCGAAATGGCAGCTTGGTTCAATGCAATTCCTGCAGATTGGGGTCCTGGAAGCCCTGTGTGGGATGATTTGGACTCACACAATAATCTTCTCTTGCCGTCACAGCTTCCTTTTGTCAACCCAAATCAACAAGAATTTAATGATGCTGATGCTCAGAGACAAGATGATAACACAGGAGCAGgttcttcaacttcttctgCTTGTCCCATGAGGCCCTTCTTCTGGAAGGGTCAAGATTG 1412 0.4681 MSAAKNSGKSNKGADDTRKIIRMEESQDREIDKGKDLDFSFQRRQWKPVFDDASVSRSPLKKIRSPERQNLNASSSVSLQPPSSSFTSAIPPNAASSPNVCPPSSSSRIVFPFAFDGPQHPLQFPQQFGTANLPLFRPPIQPTQQNQQQQMISLGPQQQNIMYPQFLVPHSAMSQQQQQQQRQQQLLRYWSDTLNLSPRGRMMMMNRLGPDGRPLYRPPSQPLNTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKASSADPNSATSSPPTPNEGQISTSSQNSKQSEAVQEGLNVQAMSTETMPTPALPKHEENTDNDSGFGSSDATVSDEVQAAAASAETGEDISQSQELVWGEMAAWFNAIPADWGPGSPVWDDLDSHNNLLLPSQLPFVNPNQQEFNDADAQRQDDNTGAGSSTSSACPMRPFFWKGQD 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02031 470 SUPERFAMILY DNA-binding domain 228 286 IPR016177 GO:0003677
Bva07g02031 470 SMART rav1_2 228 291 IPR001471 GO:0003700|GO:0006355
Bva07g02031 470 Gene3D AP2/ERF domain 228 286 IPR036955 GO:0003700|GO:0006355
Bva07g02031 470 PRINTS Ethylene responsive element binding protein signature 251 267 IPR001471 GO:0003700|GO:0006355
Bva07g02031 470 PRINTS Ethylene responsive element binding protein signature 229 240 IPR001471 GO:0003700|GO:0006355
Bva07g02031 470 Pfam AP2 domain 229 277 IPR001471 GO:0003700|GO:0006355
Bva07g02031 470 MobiDBLite consensus disorder prediction 1 38 - -
Bva07g02031 470 CDD AP2 227 287 IPR001471 GO:0003700|GO:0006355
Bva07g02031 470 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 1 467 - -
Bva07g02031 470 MobiDBLite consensus disorder prediction 292 329 - -
Bva07g02031 470 MobiDBLite consensus disorder prediction 50 103 - -
Bva07g02031 470 MobiDBLite consensus disorder prediction 341 385 - -
Bva07g02031 470 MobiDBLite consensus disorder prediction 294 329 - -
Bva07g02031 470 ProSiteProfiles AP2/ERF domain profile. 228 285 IPR001471 GO:0003700|GO:0006355
Bva07g02031 470 MobiDBLite consensus disorder prediction 430 470 - -
Bva07g02031 470 MobiDBLite consensus disorder prediction 11 38 - -
Bva07g02031 470 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 467 - -
Bva07g02031 470 MobiDBLite consensus disorder prediction 65 103 - -
Bva07g02031 470 MobiDBLite consensus disorder prediction 430 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02031 Bva-Chr7 17575344 17578057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02031 1 415 AP2-EREBP Transcription Factor Family AT2G20880 40.431 1.64e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva07g02031 AP2 3.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02031 - - jre:109013328 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g02031 07 17575344 17578057 Bva07g02031 07 17575344 17578057 ECH