Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02006 ATGGGTTGCATATCCTCCAAAAGTGCAGCTGTGGAAGACAGCCGGGAAGGattgacaaagaaaatttcatcatCTAACAAAAGGTCATCGGAGCTGAATGTTTCGCGACTGAATTCCTCGAAGAGGAATGAAGGAGTCTGGCAAAAAGCTAAATTAGATGGCAATGATGTCAAAGTTTCGCTAATTGACAAGAAAGCCGATAGTTCAGTGATTTCGTGTGATGATAAtattgagaagaagaaagtagaGAAGCCTGAACTTACTGTTCTTGATTACGCTGGTCTTGGAAGGGTCCCAAAGGCTACAGAAGGAGAGCAAGTTGCAGCAGGATGGCCGGCTTGGCTTTCTTCGGTTGCCGGTGAAGCTATCAAGGGATGGATACCACGTAGTGCTAATACTTTTGAGAGGTTACATAAAATTGGCCAAGGAACTTACAGTAATGTTTACAAGGCACGCGATGTGACACACCAAAAGATTGTTGCTTTGAAAAGAGTACGCTTTGATAACCTTGATCCAGAGAGTGTGAAGTTTATGGCAAGGGAAATCGTTATCCTACGTAGGCTTGACCatccaaatataataaagttgGATGGCTTGATAACATCTGAGTCATCTCGCAGTTTGTACCTTGTGTTTGAGTATATGGAGCATGATCTCACGGGACTAGCAGCACGTCCCGGCATTAAATTTACAGAACCACAGATTAAATGCTACGTGCATCAACTTCTTAGTGGATTGGATCATTGTCATAGTCGTGGTATCCTCCACCGTGACATAAAAGGCTCAAATCTTCTCATCGACAATAATGGCATCTTAAAGATTGCAGATTTTGGTTTGGCAAATTATTTTGACCCCCATCACAGTGTTCCATTGACCAGCCGCGTGGTGACACTGTGGTATAGACCACCAGAACTCTTACTTGGGGCATCTCATTATGGAGTTGCGGTGGATTTGTGGAGTGCTGGTTGCATAGTGGGAGAATTATATTCTGGCAGGCCCATATTGCCAGGCAAAACAGAGGTTGAGCAATTGCATAGGATTTTTAAGCTTTGTGGCTCACCTTCTGAAGACTATTGGCTTAAGTTACGGTTACGACATTCAACAGCATTCAAGCCTCCTCATCATTATAGACGATGTGTTGCAGAAACATTTAAGGAACATCCATTTTCTGCCTTAAGGCTTATAGAGACCCTACTTTCCCTGGATCCTTCTGATCGAGGAACAGCAGCTACTGCTTTGAAAAGCGAGTTCTTTACAACAGAACCCCTTGCTTGTGATCCTTCAAGTTTACCAAAATATCCTCCCAGCAAAGAGATCGATGCAAAATTGCGCGATGAAGCAAACAGAAGGCAAGGTGCAATTGGTGGAAGGGAGCAGAAAGTTGGTTCTGGAGTTAGACAAGAACCTCGTTCGCAACTATCATCACAAGACAATGCTGAGCTACGCTTATCAATGCAGCAAGGGCATCGGCATCCCAGCTCAAAGAACAAGAGTGAATTGTTCAAACGTCCCGGGAAACCTGTTTCTGGAGTTTTGGCTTTTCCACGTAAGCAGTCAGAAGATGgtaaagaaatggaaaacaaTTTATCTGGGCATCTTTATAAGAGGCCTACACATTATTCAGGTCCATTGGTATATGGTCCTGGCACGGCAAAGGGTGGGAAGGATGTTGATGAGCACCCTCCTGTTTCAAACAGAGCCAACCTTTCAAAAGTATCTGGTTTAGTGGCATCTAGGACATTACTGTCTGATCAGGAAGAAAAATCAGTTCCCTTGCAGCCCAAGAAAACACGTGAAGTACGGAAATCTGTGCAGTCAACTAATGGATCAGATTCAAGGAAGAGGCTGGATCAAAGACATCATCGGTCTCAGAGAATGGCGGATTTCTGtcaaatagaaaatggaagagCCCCCACTGATGAGTCAACTCCGGAAGGGCGTGGGTCCAGGGGCAGCAACAACAAGATCTATCTTTCTGGTCCACTACTTGTTTCCTCAAACAACATGGATCAGATGCTAAAAGAACATGATCAAAAGATCCAGAAATACTCAAGACGAGCACGAATTGAAAAGTCAAAAGCTGACAAAGTTCGTGCACAGAGAAAGTA 2108 0.4241 MGCISSKSAAVEDSREGLTKKISSSNKRSSELNVSRLNSSKRNEGVWQKAKLDGNDVKVSLIDKKADSSVISCDDNIEKKKVEKPELTVLDYAGLGRVPKATEGEQVAAGWPAWLSSVAGEAIKGWIPRSANTFERLHKIGQGTYSNVYKARDVTHQKIVALKRVRFDNLDPESVKFMAREIVILRRLDHPNIIKLDGLITSESSRSLYLVFEYMEHDLTGLAARPGIKFTEPQIKCYVHQLLSGLDHCHSRGILHRDIKGSNLLIDNNGILKIADFGLANYFDPHHSVPLTSRVVTLWYRPPELLLGASHYGVAVDLWSAGCIVGELYSGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKLRLRHSTAFKPPHHYRRCVAETFKEHPFSALRLIETLLSLDPSDRGTAATALKSEFFTTEPLACDPSSLPKYPPSKEIDAKLRDEANRRQGAIGGREQKVGSGVRQEPRSQLSSQDNAELRLSMQQGHRHPSSKNKSELFKRPGKPVSGVLAFPRKQSEDGKEMENNLSGHLYKRPTHYSGPLVYGPGTAKGGKDVDEHPPVSNRANLSKVSGLVASRTLLSDQEEKSVPLQPKKTREVRKSVQSTNGSDSRKRLDQRHHRSQRMADFCQIENGRAPTDESTPEGRGSRGSNNKIYLSGPLLVSSNNMDQMLKEHDQKIQKYSRRARIEKSKADKVRAQRK 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02006 702 PANTHER CELL DIVISION PROTEIN KINASE 1 690 - -
Bva07g02006 702 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Bva07g02006 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Bva07g02006 702 MobiDBLite consensus disorder prediction 465 491 - -
Bva07g02006 702 Gene3D Transferase(Phosphotransferase) domain 1 222 455 - -
Bva07g02006 702 Pfam Protein kinase domain 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02006 702 MobiDBLite consensus disorder prediction 672 702 - -
Bva07g02006 702 Gene3D Phosphorylase Kinase; domain 1 128 221 - -
Bva07g02006 702 MobiDBLite consensus disorder prediction 645 671 - -
Bva07g02006 702 MobiDBLite consensus disorder prediction 544 702 - -
Bva07g02006 702 Coils Coil 666 693 - -
Bva07g02006 702 CDD STKc_CDK9_like 134 418 - -
Bva07g02006 702 MobiDBLite consensus disorder prediction 451 526 - -
Bva07g02006 702 MobiDBLite consensus disorder prediction 23 43 - -
Bva07g02006 702 PANTHER CYCLIN-DEPENDENT KINASE 1 690 - -
Bva07g02006 702 MobiDBLite consensus disorder prediction 1 43 - -
Bva07g02006 702 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02006 702 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02006 702 MobiDBLite consensus disorder prediction 612 627 - -
Bva07g02006 702 MobiDBLite consensus disorder prediction 566 587 - -
Bva07g02006 702 SUPERFAMILY Protein kinase-like (PK-like) 127 424 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02006 Bva-Chr7 17472469 17477517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02006 126 461 Core Cell Cycle Gene Families AT5G10270 50.000 3.29e-111 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva07g02006 Pkinase 7.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02006 - - gmx:100807590 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00621 09 3270293 3275278 Bva07g02006 07 17472469 17477517 BWGD