Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g02005 ATGTCTCCACTTACTCTTCTCTGTCTTGCCATCCTCTTCCACACTGCAAACCCTCTCTGCTTAGTCTCAGCTACTGAATTTGTGTATAATACAAACTTCAACTCTACTAATATCAACCTCTATGGCGATGCCACTATTGAGTCTTCCATTTTGGCTCTCACCAATCACAGTGTCTTGTCCCTAGGCCGTGCTTTCTACCCTCAAAAAATACCCATCAAACAGGCCAACTCTTCCTCCCTTTTGTCATTTGCAACctccttcattttctctatAGCCCCAGTTAAAGGCTTTGGTACTGGTCATGGATTTGCTTTCATGTTCTCACCGTATAAGGGCATAAATGGCACGTCCCCAGTTGAGTATCTTGGTCTGTTAAACTTTTCCAATCAGGGTAATCCTAATAACCATGTTTTGGGAGTTGAGTTTGATATATTTAGCAATGAAGAATTCCTTGATATCAATGACAATCATGTTGGTATAGATATAAACTCCCTCACTTCTTCAGATTCATATGAGGCTGGGTATTGGGATGGAGAATTCGATAATGAATTTAAGAAGCTCGAgttaaaaaatggaagaaattatCAGGTATGGATTGAGTTTATGGATTCACAGCTTAATATCACAATGGCTCAGGCAGGAAGAAAAAAGCCTCAACGGCCTCTGATTAGCATGACTGTTAATCTTTCTGGAGTACTTTTAGATGAAATGTATGTTGGGTTTTCTGCAGCAACAGGGAAGATGATAGACAGTGTTAGAATTCTGGCTTGGAGTTTTAgtaattctaaattttccaTTGGCGATGCTTTGATCACCAACAATTTGCCATCATTTGAGGATCAGAAAGGGTCGTTTTCTGTATCACTAGCTCTAGGCATAGGGGTCAGTGGTGTTTGTGTCTTACTCATTGGCTGTGGTTCTGTGGCCTTTTTCATTCTGAGGAGAGGAGAAGGTAAGAcagaggaagaaattgaagattgGGAACTGGAGTACTGGCCTCACAGGATTAGTTACCTTGAAATTGATGCAGCAACAAGAGGATTCTCAGAAGAGAATGTGATTGGGATTGGAAGGAATGGCAAAGTATATAAAGGGGTCTTGCAAGGAGTTGAAGTTGCAGTCAAAAGAATCCCTCAAGAAGCAGATGAAGGGATAAGGGAGTTTTTGGctgaaatttcaagcataggcAGAATGAAACACAGAAATTTAGTGGGGATGAGAGGTTGGTGcaagaaagagaagggaagCTTGATGTTAGTGTATGATTATATGGAGAATGGAAGTTTGGACAAGAGGATCTTTGAGTGTGAAGAGAGAAAGATGCTTAGTTGGGAAGAGAGAGTTCAAGTTTTGAAGAAAGTAGCTTTTGGAATTCTTTATTTGCATGAAGATTGGGAAGTCAAGGTCCTGCATAGAGATATCAAATCAAGTAATGTTCTACTTGATAAAGATATGAATGCTAGGTTGGGGGATTTTGGATTAGCTCGAATGCATGATCATCATGGGCAAGTAGCCAACACAACAAGAGTAATAGGAACAGTGGGATACTTGGCTCCGGAAGTAGTTAAAGCAGGAAGAGTCTCAACTCTATCTgatgtttttggttttggaatATTGGTTTTGGAAGTGGTCTGCGGGAGAAGACCCATTGAAGAAAGTAAGCCAGGACTAATTGAGTGGTTGCTGTCCCTAATGAAGATTGGTGAATTGCAATGCGCTCTTGATCAGCGATTGAAGGCGAAAGGAGGATACACCATAgaagaagttgagaaattgcTTTACTTGGGATTGTTATGTGCAAATCCAGATCCTGGTGTTAGACCAACAATGAGACAGATTGTGAAAATGATGGAGGAGGGAATCGAAGGCAATGACTCAGATGGGGACAGTATGGAAACGAGTTtacttggaaaaataaattcagcaGCAATGTGGTCCGGAGCAGTTACTACTTCCCCCACCAGTGGTCACCCCACCATTGATGAAATTATGttcagttttaattttaatagtgTATCAGATACCATCCCAAACTCTGACATTATCCGTCAAGGCAGgta 2060 0.3777 MSPLTLLCLAILFHTANPLCLVSATEFVYNTNFNSTNINLYGDATIESSILALTNHSVLSLGRAFYPQKIPIKQANSSSLLSFATSFIFSIAPVKGFGTGHGFAFMFSPYKGINGTSPVEYLGLLNFSNQGNPNNHVLGVEFDIFSNEEFLDINDNHVGIDINSLTSSDSYEAGYWDGEFDNEFKKLELKNGRNYQVWIEFMDSQLNITMAQAGRKKPQRPLISMTVNLSGVLLDEMYVGFSAATGKMIDSVRILAWSFSNSKFSIGDALITNNLPSFEDQKGSFSVSLALGIGVSGVCVLLIGCGSVAFFILRRGEGKTEEEIEDWELEYWPHRISYLEIDAATRGFSEENVIGIGRNGKVYKGVLQGVEVAVKRIPQEADEGIREFLAEISSIGRMKHRNLVGMRGWCKKEKGSLMLVYDYMENGSLDKRIFECEERKMLSWEERVQVLKKVAFGILYLHEDWEVKVLHRDIKSSNVLLDKDMNARLGDFGLARMHDHHGQVANTTRVIGTVGYLAPEVVKAGRVSTLSDVFGFGILVLEVVCGRRPIEESKPGLIEWLLSLMKIGELQCALDQRLKAKGGYTIEEVEKLLYLGLLCANPDPGVRPTMRQIVKMMEEGIEGNDSDGDSMETSLLGKINSAAMWSGAVTTSPTSGHPTIDEIMFSFNFNSVSDTIPNSDIIRQGR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g02005 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Bva07g02005 686 SUPERFAMILY Protein kinase-like (PK-like) 325 617 IPR011009 -
Bva07g02005 686 PANTHER - 4 673 - -
Bva07g02005 686 Gene3D Transferase(Phosphotransferase) domain 1 424 635 - -
Bva07g02005 686 CDD STKc_IRAK 354 619 - -
Bva07g02005 686 SMART serkin_6 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02005 686 CDD lectin_legume_LecRK_Arcelin_ConA 25 262 IPR001220 GO:0030246
Bva07g02005 686 PANTHER LECTIN RECEPTOR KINASE 4 673 - -
Bva07g02005 686 Gene3D - 23 273 - -
Bva07g02005 686 Pfam Protein kinase domain 349 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02005 686 Pfam Legume lectin domain 25 263 IPR001220 GO:0030246
Bva07g02005 686 ProSitePatterns Protein kinases ATP-binding region signature. 354 375 IPR017441 GO:0005524
Bva07g02005 686 ProSiteProfiles Protein kinase domain profile. 348 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g02005 686 Gene3D Phosphorylase Kinase; domain 1 313 423 - -
Bva07g02005 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 262 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g02005 Bva-Chr7 17468212 17469957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g02005 22 566 Receptor kinase-like Gene Family AT4G04960 57.762 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva07g02005 Pkinase 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g02005 - - gmx:100804553 975.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva09g00624 09 3283116 3284963 Bva07g02005 07 17468212 17469957 BWGD
Bva07g02005 07 17468212 17469957 Bva09g00623 09 3280284 3282363 BWGD
Bva07g02005 07 17468212 17469957 Bva07g02005 07 17468212 17469957 ECH