Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01997 ATGGTCGACTTATCCAGTTTCAGAACCACAACAGATGCGCAAGATCCTCTCGCGCCTTGCCTCCGGTCGATCACGGAAGCGCTAGAAGATGGGATCCTAAGCGATTATTCAGGTTCAAATCTTATTGAACTTCTAAGAGATTGCATTGGAAACTTCAAGGACAGTGACCGGTACCGAAATGACACCAGATTTCTTAAGATTTGGCTCCTATATATGAGCGTGAGTGAAGATTTTGAGAGAGTTTTCAGAGAAATGATGGATAATGAAATATGTGCGGGTCATTCTTCAGTTTATGTGTGGTCAGCATCTTTTCTTGAATCAAAAGGGAAATGGCATGATGCCCACAAGCTCTATCAGCTTGGTATTTTCAGGAATGCGGAACCAATAGAGTGGTTGAAGAAGGCGCACGCTTCATTTCTTAGAAGAATTTATGACAATGTTGCTTTGTGTCAAAAGATTGATGATAAAGAATCCACGAAGTTTGGAATTGGTGCCATTAATCCATGGTGCGGTTCCACCATGGATGATCTATCAAAGAAGATAGATCCTTTAATTGCAAAATATAAAGGATATCATTCGAGTACAAAAGCTTTCACAGGAAAACTGGTCTTATCTTCTTTGAAGAATTCATCAAGGAATAAAGTTATAGAGATAGGTGGAAAGAAGTACCAGATCAAGGGTTGTGCTGGACAGGGTGGTTTTGCTCAAGTCTACAAGGCATATATCAACAGTAATCCTGACGAAGTTGTGGCATTGAAGATACAAAAGCCAGCTTTCTCTTGGGAATTCTACATGTATCGTCAGCTTGATCTGCGTATCGTAGACAGAGAAAGGTCAAATTACGGTTTCGCTCATGGTATTCATCTCTGTTCTAACTGTAGTATCCTCGTCTGTGACTATTTAGCTCATGGGACGCTTCAGGATGTCATAAACTCGTATGTGGTCGTAGCGAAATCCATGGAGGAAGTATTATGCATTTATTACACTATAGAAATGTTACGCATGCTGGAAACTTTACATGATTGTGGCATAATTCATGGTGATTTCAAGCCTGACAATCTGCTTATTCGCTATGCCAAGGGTGACCTCGCAGAAGATGGGATCTTGGACCGAAAGGGTCCTTGGTGTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGCATTGATCTTCATCTCTTTCCCGATGGCACAGTATTTAAGGGAGATTGTCGAACTTCCGGTTTTCGCTGCATTGAGATGCAAGAGGATAAGCCATGGAAATTTCAGGTAGACGCATATGGCCTTTGCGCTGTCGTCCATGTGATGCTGCATAATTCTTATATGGAGATCGTCAAAAAGGAAACATCTGACGGAGCCTTCATTTATCAACCCAGACTGCCCTTTAAACGTTACTGGAATACTGAGCTCTGGAACGCTTTCTTCACCAAGATGCTAAATCAATACCCCGGTGCTGATGATAGAAGCTTGTTGCAAGATTTGAGGAAGTCCTTCCAGGATTATATGGCTTCCAACACCCAGCTTGTAAAGAAACTAAAGGAGTTACTCGTGAAGCAAAGGGCTTCCTTGTGTTCTGCCTA 1580 0.4222 MVDLSSFRTTTDAQDPLAPCLRSITEALEDGILSDYSGSNLIELLRDCIGNFKDSDRYRNDTRFLKIWLLYMSVSEDFERVFREMMDNEICAGHSSVYVWSASFLESKGKWHDAHKLYQLGIFRNAEPIEWLKKAHASFLRRIYDNVALCQKIDDKESTKFGIGAINPWCGSTMDDLSKKIDPLIAKYKGYHSSTKAFTGKLVLSSLKNSSRNKVIEIGGKKYQIKGCAGQGGFAQVYKAYINSNPDEVVALKIQKPAFSWEFYMYRQLDLRIVDRERSNYGFAHGIHLCSNCSILVCDYLAHGTLQDVINSYVVVAKSMEEVLCIYYTIEMLRMLETLHDCGIIHGDFKPDNLLIRYAKGDLAEDGILDRKGPWCDQGLCLVDWGRGIDLHLFPDGTVFKGDCRTSGFRCIEMQEDKPWKFQVDAYGLCAVVHVMLHNSYMEIVKKETSDGAFIYQPRLPFKRYWNTELWNAFFTKMLNQYPGADDRSLLQDLRKSFQDYMASNTQLVKKLKELLVKQRASLCSA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01997 526 Pfam Mad3/BUB1 homology region 1 11 122 IPR013212 -
Bva07g01997 526 SUPERFAMILY Protein kinase-like (PK-like) 220 480 IPR011009 -
Bva07g01997 526 ProSiteProfiles BUB1 N-terminal domain profile. 3 161 IPR013212 -
Bva07g01997 526 ProSiteProfiles Protein kinase domain profile. 223 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g01997 526 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 11 147 IPR015661 GO:0007094
Bva07g01997 526 Gene3D - 5 158 - -
Bva07g01997 526 Gene3D Transferase(Phosphotransferase) domain 1 220 524 - -
Bva07g01997 526 PANTHER BUB1 KINASE, ISOFORM A-RELATED 158 525 - -
Bva07g01997 526 PANTHER BUB1 KINASE, ISOFORM A-RELATED 11 147 - -
Bva07g01997 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 344 356 IPR008271 GO:0004672|GO:0006468
Bva07g01997 526 SMART mad3_bub1_i 21 122 IPR013212 -
Bva07g01997 526 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 158 525 IPR015661 GO:0007094
Bva07g01997 526 Pfam Protein kinase domain 225 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva07g01997 526 SMART serkin_6 223 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01997 Bva-Chr7 17421489 17427095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01997 115 356 Receptor kinase-like Gene Family AT2G19210 27.969 3.51e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Bva07g01997 Pkinase 1.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01997 K02178 - gmx:100783171 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01997 07 17421489 17427095 Bva07g01997 07 17421489 17427095 ECH