Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01993 ATGACAGGCAAAGAAATCCTCCATAAGATGAAGGAGAAAGCTGGTTTTGCAACATCAGCAGCTGATACAGGGAAaggaaaaagcaaaatttCAAAGCATATCACACATGGATTTTACTTAAAGAAGGGAAAATCAGGACACCCTATGGAAGATTATGTAGTTTCAGAATTTAAGCAAGAAAGAGATAAAGAGTTAGGCTTGTTTGCAATATTTGATGGTCATTTAGGCCATGATGTTGCAAACTATTTGCAGAACAACCTTTTTGACAGCATCTTAAAACAGCAAGACTTCTGGACTGCTCCAGAAAACGCAGTAAGGAGAGGTTACCTTACAACAGATGAGAAAATACTGGAACAAGCATTTGTCTTGGGAAAAGGAGGATCAACTGCAGTAACTGCAATACTTATTAACGGTCAGAAGCTCGTAGTAGGAAATGTTGGAGACTCTCGAGCTGTTATTTGCAAGAATGGGAAGGCCGAGCAACTGTCGGTTGATCATGAGccaagcaaagaaaaaagggataTTGAGAAGCGTGGTGGTTTTGTATCAAACATTCCAGGAGATGTTCCTCGTGTGGATGGTCAATTGGCAGTAGCAAGGGCTTTTGGTGATAAAAGCTTGAAGATGCACCTTAGTTCTGAACCTCATGTGGTAACAGAGAGGATAAGTGAAAACGTGGAGTTCCTTATTCTGGCAAGTGATGGAATATGGAAGGTTATGTCAAACCAAGAAGCAGTAGACTCTATTAGACACATAAAGGATGCTAAGGATGCAGCAAAGCACTTGATAGAAGAAGCCATCACTAAGAAAAGTAAGGATGATATATCCTGCATAGTTGTGAGGTTCCAATG 851 0.389 MTGKEILHKMKEKAGFATSAADTGKGKSKISKHITHGFYLKKGKSGHPMEDYVVSEFKQERDKELGLFAIFDGHLGHDVANYLQNNLFDSILKQQDFWTAPENAVRRGYLTTDEKILEQAFVLGKGGSTAVTAILINGQKLVVGNVGDSRAVICKNGKAEQLSVDHEPSKEKRDIEKRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKMHLSSEPHVVTERISENVEFLILASDGIWKVMSNQEAVDSIRHIKDAKDAAKHLIEEAITKKSKDDISCIVVRFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01993 283 CDD PP2Cc 36 282 IPR001932 -
Bva07g01993 283 SUPERFAMILY PP2C-like 31 282 IPR036457 -
Bva07g01993 283 SMART PP2C_4 30 280 IPR001932 -
Bva07g01993 283 Gene3D - 15 283 IPR036457 -
Bva07g01993 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Bva07g01993 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
Bva07g01993 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Bva07g01993 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01993 Bva-Chr7 17401546 17403623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01993 1 283 PP2C-type Phosphatase Gene Family AT3G15260 69.550 1.48e-145 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01993 K17506 - cit:102608973 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01993 07 17401546 17403623 Bva07g01993 07 17401546 17403623 ECH