Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01992 ATGAGCACTACTGTCTGCGCCGAGCAGCATAAGTTTCACCCCTCTCTCCATCTCCAGAAGAAACCGCTCGTCAGAGACATTGACATTCCACCCAGGAAGCTCCTCACTCGCCGTGTCAATGCCCATGAAGGTGCTGCTGCTGATTCACCGCGCTTCTCCTCCTCCGAGGAGACCCTCTTGCAGAAATTCCTTCCCTACAACAATTTGATGGAGTCTGATGATGAATCCGACCCTTATTCTTCTGATCACTTTCGCATGTATGAGTTTAAGGTCCGTCGATGCACTCGTAGCCGGAGCCATGACTGGACAGACTGCCCATTTGCTCATCCCGGCGAGAAAGCTCGCCGCCGTGACCCCAGACGGTATCACTACTCGGGTACTGTTTGTTCGGATTATCGCCGTGGTGGATGCTGCCGCGGAGATAGCTGTGAGTTTGCTCATGGGGTGTTTGAGTGCTGGCTTCATCCAGCAAGGTACAGAACTGAAGCTTGCAAGGATGGCAAGAATTGCAAGCGAAAGGTATGCTTTTTTGCTCACACTCCTCGCCAACTCAGGATTTTGGCTGTGAATTCCTACGATTCCACAGCTGACGCCAAGAAGAGCAAATTCTTGAATAACAACTGCTGCTTGTTTTGCCATTGCTCTTCTACTTCCTCTCCTACTTCTACTCTGTTGGGAATGTCTCATTTTTCTCCACCACTGTCACCGTCATCGTCCTCTGTCTCGCCGCCTCTTTCGCCGGTCAAACAACGCCGGACTGCAAATGGGTTATCGCCTATTTCTCGATACAGTGACAGATTTGGGGGATCCGAGACATCAAGTGGGCTGAATCTTGGGGTGGTGAGCTACAAAGATGTGCTCACCGAGTTGATGAGCTCCTTGGAGGGTCTGAACTTCTGTGAAGATTCACCTGTTTCTGCTCACAAGACATCCAATCTGCCTTGGGTTGATGGttcttttaactttgaagatcagcaacagcagcagcagttGTTCATTCTTTCACCAACTGCTTCTTTCAATTGCGAAGATCAGCAGCAATTTATTCTTTCACCATCCACTCAGACCCCAACTACATCTGGGTCTGCAAGTTTTTCTAATGGGAACTATTTTAGCAACAAAATCTTCAGCAACGAGAGCAAGGTTGCCACTGATAATGGATCGTCATGCTCAGCCCCAGATCTCGGGTGGGTCAATGAGCTGCTAATGTA 1211 0.4806 MSTTVCAEQHKFHPSLHLQKKPLVRDIDIPPRKLLTRRVNAHEGAAADSPRFSSSEETLLQKFLPYNNLMESDDESDPYSSDHFRMYEFKVRRCTRSRSHDWTDCPFAHPGEKARRRDPRRYHYSGTVCSDYRRGGCCRGDSCEFAHGVFECWLHPARYRTEACKDGKNCKRKVCFFAHTPRQLRILAVNSYDSTADAKKSKFLNNNCCLFCHCSSTSSPTSTLLGMSHFSPPLSPSSSSVSPPLSPVKQRRTANGLSPISRYSDRFGGSETSSGLNLGVVSYKDVLTELMSSLEGLNFCEDSPVSAHKTSNLPWVDGSFNFEDQQQQQQLFILSPTASFNCEDQQQFILSPSTQTPTTSGSASFSNGNYFSNKIFSNESKVATDNGSSCSAPDLGWVNELLM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01992 403 SMART c3hfinal6 158 181 IPR000571 GO:0046872
Bva07g01992 403 SMART c3hfinal6 123 149 IPR000571 GO:0046872
Bva07g01992 403 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 2 26 402 - -
Bva07g01992 403 PANTHER UNKEMPT FAMILY MEMBER 26 402 IPR045234 -
Bva07g01992 403 MobiDBLite consensus disorder prediction 235 254 - -
Bva07g01992 403 Gene3D - 122 187 - -
Bva07g01992 403 ProSiteProfiles Zinc finger C3H1-type profile. 124 150 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01992 Bva-Chr7 17397903 17399291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01992 73 243 C2H2 Transcription Factor Family AT5G12850 48.538 1.06e-52 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bva07g01992 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01992 K23047 - jre:108986638 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01992 07 17397903 17399291 Bva07g01992 07 17397903 17399291 ECH