Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01975 ATGCTCGCGGTGTCACCTTTGAGGAGAGCCACCAAAGATGAAAATCAAGGAGAGATGGAGAGCTTCTCGATGGTCACTGATGATTTTGGAGACCTTTCGGATGGGAATATATTGGAAAGTATCAATTTTGATGATCTCTTCGGGGGTATCAACGTTAACGATGGAGATGTCTTGCCTGATTTGGAGATGGACCCAGAGATCTTTGCCGAGTTTTCCCTTAGCGGCGGGGAGGAATCGGAGTTGACCTCATCAGTTTCAGtagataataattacaataatactaataataaagCTCATCGTGAGTCGACGACGAAGAAAGTGGACGACGAAGATAAAGTTTCTAATTCGGGTTCGGGTTCATCAAATATTTCTGAGTCAAGTCGAGGAGATCAGGCCGAGATATTGAGCAAAAAAGATGAATCTGTCGTGGTTAATCCATCGCCGAAAGAAGCTGACAAGGGAAGAAAGTCTGCTCAATCTAATAAGAATTCTCAAGggaagagaaaagtgaagGTTGATTGGACCCCGGAATTGCACAGGCGATTTGTGCAAGCAGTTGAGCAACTAGGAGTGGATAAGGCAGTCCCTTCAAGGATTTTAGAGATTATGGGAATTGACTGTCTCACTCGCCATAACATTGCCAGCCACCTTCAAAAATATCGATCGCATAGGAAACATTTACTGGCACGTGAAGCAGAAGCAGCAAGCTGGAGTCAGAGAAGGCAGATGTATGGAGTAGCAGGTGCaggtggaggaggaggaaaGAGAGAAGTTAGCCCTTGGCCAGCACCCACCATGGGTTTCCCTCCCATGACTCCTCCAATGCACCATTTTAGACCCTTACATGTATGGGGGCATCCCACCATGGACCAGTCATTTGTGCACATGTGGCCAAAACACCTACCACCACATTCCCCGTCACCACCACCGCCGGCGTGGGCACCGCCACCACCGCTTGACCCTTCTTACTGGCACCAAAGGGCTCCTAACACGCTAACCCCAGGAGCACCGTGTTTTCCACAACCCCTGACTACAACGAGATTCCCCTCGTCTCCTCCTGTCCCGGGCATCCCTCCCCATGCCATGTACAAAGTAGATCCCGGCATTGGCATCCCGACCGGGCAACCAGGCCCACGGCCTCTCTGCGACTTACACCCCTCAAAGGAGAGCATAGATGCAGCTATTGGAGATGTTTTGTCAAAACCATGGCTGCCACTGCCACTTGGTCTTAAAGCACCAGCGCTTGATAGCGTGATGGGTGAATTACAGCGACAAGGAATTCCCAAGATTCCACCCTCTTGTGCTTG 1307 0.4774 MLAVSPLRRATKDENQGEMESFSMVTDDFGDLSDGNILESINFDDLFGGINVNDGDVLPDLEMDPEIFAEFSLSGGEESELTSSVSVDNNYNNTNNKAHRESTTKKVDDEDKVSNSGSGSSNISESSRGDQAEILSKKDESVVVNPSPKEADKGRKSAQSNKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAASWSQRRQMYGVAGAGGGGGKREVSPWPAPTMGFPPMTPPMHHFRPLHVWGHPTMDQSFVHMWPKHLPPHSPSPPPPAWAPPPPLDPSYWHQRAPNTLTPGAPCFPQPLTTTRFPSSPPVPGIPPHAMYKVDPGIGIPTGQPGPRPLCDLHPSKESIDAAIGDVLSKPWLPLPLGLKAPALDSVMGELQRQGIPKIPPSCA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01975 435 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 166 225 IPR017930 -
Bva07g01975 435 Pfam Myb-like DNA-binding domain 172 221 IPR001005 -
Bva07g01975 435 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 169 223 IPR006447 GO:0003677
Bva07g01975 435 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 435 IPR044825 GO:0003700|GO:0045893
Bva07g01975 435 SUPERFAMILY Homeodomain-like 167 226 IPR009057 -
Bva07g01975 435 MobiDBLite consensus disorder prediction 131 157 - -
Bva07g01975 435 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 435 - -
Bva07g01975 435 MobiDBLite consensus disorder prediction 302 350 - -
Bva07g01975 435 MobiDBLite consensus disorder prediction 302 323 - -
Bva07g01975 435 MobiDBLite consensus disorder prediction 99 113 - -
Bva07g01975 435 MobiDBLite consensus disorder prediction 74 171 - -
Bva07g01975 435 Gene3D - 166 227 - -
Bva07g01975 435 MobiDBLite consensus disorder prediction 114 130 - -
Bva07g01975 435 MobiDBLite consensus disorder prediction 76 98 - -
Bva07g01975 435 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01975 Bva-Chr7 17328715 17331725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01975 30 386 G2-like Transcription Factor Family AT5G44190 41.192 3.13e-63 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva07g01975 Myb_DNA-binding 5.6e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01975 - - jre:109001455 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01975 07 17328715 17331725 Bva07g01975 07 17328715 17331725 ECH