Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01967 ATGCTGGAAAAGATGGATGATGGAGAAATCTCAAATGGTTTTTCTCACAACCCAGCTGCTGCATCTGATAATCCTCCTGTtttgaagaggaagagaaaccTTCCAGGAAACCCAGATCCTGATGCAGAAGTGATAGCTTTATCTCCAAAGACTCTCATGGCAACAAACAGATTCCTGTGCGAAATCTGTGGGAAGGGTTTCCAAAGGGATCAAAATCTTCAACTCCATAGACGTGGACATAACCTTCCATGGAAACTTAAGCAGAGGACAAGCAAAGAAGTAAGGAAGCGCGTTTATGTCTGCCCTGAAAAGTCCTGTGTTCACAACCACCCTTCAAGGGCTCTGGGAGACTTAACTGGGATAAAGAAGCACTTCTGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGAGAAGTGCTCAAAGCGTTATGCCGTGCAGTCAGATTGGAAAGCGCACTCAAAAACCTGTGGCACCAGAGAATACAAATGTGACTGTGGCACAATCTTTTCAAGGAGGGATAGCTTCATAACTCATAGGGCCTTCTGTGATGCCTTGGCAGAAGAATCTGCTAGAGTTAATGCAACATCCAACATGAATAGTTCATTAGGGGGCAACGTCAGTTACAACATCATGGGAACTTCCCTAGGGCcaaacatggcaacccatttttcttcaattttcaagcCAATTTCAAGCAATGACGAAACAAGTAACCAAACATCAAGGGGGCTATCCCTATGGATGGGTCCTGGCTCTCAATCTCACGAAACAATGGGTATTGGTAGTAATCTTCAAGAGATTCACCAACTTGGGTCTGCAACAAACTTTTCAGGTTCAATATATGGAAACCCACTTGTTTCAAATTCAAGTCCTCCAACCTCAAATTATCATCTGAGTTGGGTGTTTGGAAATAAGCTTTCTTCCAATTCTAGTCAAGAGTTAACAAGCACTTCACTTCCATTGATGAGCAATGTTGTTAAGGATGCTGGAACTGAGCCTGTAAGTGTTCCTTCCTTGTACAGTTCCCAACATCAACCACATCAAACATCCTCAGCCAACATGTCAGCAACTGCTTTGTTACAAAAAGCTGCTCAAATTGGGGTAACCTCAACTGACCCATCTTTCCTTGGGAGCTTAGGTTTGCAATGCAGTAACAGTCAAGGCCAAGATGAGAACAAGTTCTGTGGGATGTACGGTTCAGGTTCTGTACTGACTAGTCTTGGGAGTGAGACAGAGAACTCATCAGCAGGTGAATTGTCACAAATGCACCCTGCGAAACGTCGCCACGTGCAGAGTGAAGAGACTACAGCAGGGGGGCAAACTAGGGATTTTCTTGGTGTTGGAGTGCAAACCATTTGCCACCCTCCATCAATAAATGGatggatttg 1388 0.428 MLEKMDDGEISNGFSHNPAAASDNPPVLKRKRNLPGNPDPDAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKSCVHNHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEESARVNATSNMNSSLGGNVSYNIMGTSLGPNMATHFSSIFKPISSNDETSNQTSRGLSLWMGPGSQSHETMGIGSNLQEIHQLGSATNFSGSIYGNPLVSNSSPPTSNYHLSWVFGNKLSSNSSQELTSTSLPLMSNVVKDAGTEPVSVPSLYSSQHQPHQTSSANMSATALLQKAAQIGVTSTDPSFLGSLGLQCSNSQGQDENKFCGMYGSGSVLTSLGSETENSSAGELSQMHPAKRRHVQSEETTAGGQTRDFLGVGVQTICHPPSINGWI 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01967 462 Gene3D Classic Zinc Finger 54 81 - -
Bva07g01967 462 MobiDBLite consensus disorder prediction 406 438 - -
Bva07g01967 462 Gene3D Classic Zinc Finger 92 182 - -
Bva07g01967 462 ProSitePatterns Zinc finger C2H2 type domain signature. 60 80 IPR013087 -
Bva07g01967 462 ProSiteProfiles Zinc finger C2H2 type domain profile. 58 80 IPR013087 -
Bva07g01967 462 MobiDBLite consensus disorder prediction 1 42 - -
Bva07g01967 462 SUPERFAMILY beta-beta-alpha zinc fingers 57 154 IPR036236 -
Bva07g01967 462 MobiDBLite consensus disorder prediction 406 420 - -
Bva07g01967 462 PANTHER F-BOX ASSOCIATED PROTEIN 5 459 - -
Bva07g01967 462 SMART c2h2final6 58 80 IPR013087 -
Bva07g01967 462 SMART c2h2final6 99 129 IPR013087 -
Bva07g01967 462 SMART c2h2final6 134 154 IPR013087 -
Bva07g01967 462 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 5 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01967 Bva-Chr7 17300115 17301047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01967 24 462 IDZ Gene Family AT1G03840 53.707 2.14e-154 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva07g01967 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01967 K25870 - qsu:112011855 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01967 07 17300115 17301047 Bva07g01967 07 17300115 17301047 ECH