Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01958 ATGGAATTCCACAACGAAGTTGATGCTTCCAAACTGCTTGGAGCTCAAACCCACATAATCAATCACATTTTCAGCTACGTAAATTCCATGTCTCTTAGATGTGCTGTTGACTTAGGCATACCAGATATCATTCACAACCATGGCCAACCCATGCCATTTTCTCAACTCACTTCTTCTCTTCCAATTCACCCTTCAAAAAGCGGCTACGTCTATCGCTTGATGCGCTTTTTGATCCATTCTGGCTTCTTTGCACAACAAAAGGTCAGTGAGGATGACCCACAAGAGGGTTATATATTAACTGATGCATCTACACTCCTGCTTAAAGATAATCCCTTCAGTTTAACAGCATATTTGCTTACTGCCACTGATACTATTTTGACAAAGTCATGTCATGATTTGTCTACATGGTTCCAAAATGATGATTCTTCACCGTTTGTCACGGCAAATGGGATGAGTTTTTGGGAATATGCTGGCAAGCAGCCCAAGCTCAGTGAAGTTTTTAACGAGGCCATGGCAAATGATGCTACACTAGTAAGCAGTGTGGTGATCAAAAAGTGTAAAGGTGTCTTCGAGGGTATGGAGTCATTGGTTGATGTTGGGGGCGGCACGGGGAATTTGGCAAAGGCTATTGCCAAAGAATTCCCACAATTAGAATGCACGGTATTTGATCTCCCGCAAGTTGTTTCTGACTTGCAAGGGAGAGAGAACTTGAGATATATTGGAGGAGACATGTTTGAGGCCATTCCTCCAGCCAATGCCATTTTGTTGAAGTGGGTGTTGCACAATTGGAATGACGAGCAATGTGTAGAGATACTGAAGAAATGCAAGGAGGCAATTACAAGCAAaggtgaaaaaggaaaagtgatAATCATAGACATAATAATTGAGAATGAAAAGGGAGATGATGAATCAAGTGAAACACAATTGTTTTTCGacatgatgatgatggtggCTGTTactggaagagagagaaataagaaagaatggATCAAGTTATTTTTCTCTGCTGGCTTTTATGACTACAAGATAACTCCAATTTTGGGTCTAAGATCTCTCATTGAGGTTTATCCATG 1073 0.3849 MEFHNEVDASKLLGAQTHIINHIFSYVNSMSLRCAVDLGIPDIIHNHGQPMPFSQLTSSLPIHPSKSGYVYRLMRFLIHSGFFAQQKVSEDDPQEGYILTDASTLLLKDNPFSLTAYLLTATDTILTKSCHDLSTWFQNDDSSPFVTANGMSFWEYAGKQPKLSEVFNEAMANDATLVSSVVIKKCKGVFEGMESLVDVGGGTGNLAKAIAKEFPQLECTVFDLPQVVSDLQGRENLRYIGGDMFEAIPPANAILLKWVLHNWNDEQCVEILKKCKEAITSKGEKGKVIIIDIIIENEKGDDESSETQLFFDMMMMVAVTGRERNKKEWIKLFFSAGFYDYKITPILGLRSLIEVYP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01958 357 Pfam O-methyltransferase domain 131 338 IPR001077 GO:0008171
Bva07g01958 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 356 IPR029063 -
Bva07g01958 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Bva07g01958 357 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Bva07g01958 357 PIRSF O-mtase 1 357 IPR016461 GO:0008168
Bva07g01958 357 Gene3D Vaccinia Virus protein VP39 107 357 IPR029063 -
Bva07g01958 357 Gene3D - 2 106 IPR036388 -
Bva07g01958 357 PANTHER O-METHYLTRANSFERASE 8 357 IPR016461 GO:0008168
Bva07g01958 357 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Bva07g01958 357 CDD AdoMet_MTases 196 283 - -
Bva07g01958 357 PANTHER O-METHYLTRANSFERASE 8 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01958 Bva-Chr7 17263470 17265411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01958 30 343 Monolignol Biosynthesis Gene Families AT5G54160 33.856 4.26e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01958 - K16040 gmx:100781008 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01958 07 17263470 17265411 Bva07g01958 07 17263470 17265411 ECH