Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01956 ATGTGCTTTGACTTGGGCATACCAGATATAATCCACAACCATGGCAAACCCATTCCACTTTCTCAACTCATTTCTGCTCTATCAATTCACCCATCCAAAACGCGTTGCGTCAACAGCTTGATGCGCATTTTAATACATTCTGGCTTCTTTTCTCAACAGAAAGTTTCTGAGAATGAGCTAGAAGAGGGGTATGTTCCAACTGATGCACCCACACTCCTGCTTAAAGACTATCCCTTGAGTGTGACAACCTTCTTGCTTGCCATGCTTGATCCAATTTTGACAAAGCCATGGCATGATTGGGCTACTTGGTTCCAAAATGAAAATCCTACGCCAGTTGACACCACACATGGGATGACATCTTGGGAATATGCTGGAAATGATCCAAAACTTAATCATTCTTTCAAAGATGGAATGGCAAGTGATGCTAGATTAGTTACTACTTTGGTGATTGAAAAGTGTGAGGCGGTCTTCAAGGACTTGAAGTCATTAGTTGATGTTGGGGGGTGGCACAAGGACATTGACAAAGGCCATTGCCAAAGCATTCCCACTAGTCGAATGCGCTGTATTTG 569 0.4306 MCFDLGIPDIIHNHGKPIPLSQLISALSIHPSKTRCVNSLMRILIHSGFFSQQKVSENELEEGYVPTDAPTLLLKDYPLSVTTFLLAMLDPILTKPWHDWATWFQNENPTPVDTTHGMTSWEYAGNDPKLNHSFKDGMASDARLVTTLVIEKCEAVFKDLKSLVDVGGWHKDIDKGHCQSIPTSRMRCI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01956 189 Pfam O-methyltransferase domain 97 168 IPR001077 GO:0008171
Bva07g01956 189 SUPERFAMILY "Winged helix" DNA-binding domain 3 76 IPR036390 -
Bva07g01956 189 Pfam Dimerisation domain 2 44 IPR012967 GO:0046983
Bva07g01956 189 PANTHER ORCINOL O-METHYLTRANSFERASE 3 188 - -
Bva07g01956 189 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 189 IPR016461 GO:0008168
Bva07g01956 189 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 79 168 IPR029063 -
Bva07g01956 189 Gene3D Vaccinia Virus protein VP39 75 186 IPR029063 -
Bva07g01956 189 Gene3D - 1 73 IPR036388 -
Bva07g01956 189 PANTHER O-METHYLTRANSFERASE 3 188 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01956 Bva-Chr7 17251209 17251778 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01956 3 168 Monolignol Biosynthesis Gene Families AT5G54160 25.294 5.00e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01956 - K16040 gmx:100781008 238.039