Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01955 ATGGAATTCCACAACGAAGTTGATGCTTCCAAAATGCTTGTAGCTCAAACCCACATAATCAATCACATTTTCAGCTACGTAAATTCCATGTCCCTTAGATGTGCCGTTGACTTAGGGATACCAGATATCATTCACAGCCATGGCCAACCCATGCCGCTTTCTCAActcatttcttctcttcctatTCACCCTTCAAAAAGCCGCTACGTCTATCGCTTGATGCGCTTTTTGATCCATTCTGGCTTCTTTGCACAACAAAAGGTCAGTGAGGATGACCCAGAAGAGGGTTATATATTAACTGATGCATCTACACTCCTGCTTAAGGACAACCCCTCAAGTGTAACACCTTTGCTGCTTCTTGGGACTGATCCAACTTTCATTAAGTCAGGTTTGGAGTTTTCTGCTTGGTTCCAAAATGATGATACTACCCTATTTGAAACGGCAAACGGGATGAGTTTATGGGAATATACAAGCAAGCATCCCGAGTTCAGTCAAGTTTTGAATGAGGCCATGGGAAATGATGCTACACTAGTTAGCAGTCGGGTGATTGAGAAGTGTAAAGGTGTCTTTGAGGGTTTGGAATCATTGGTTGATGTTGGGGGTGGCACGGGAAATTTGGCAAAGGCTATTGCCAAAGAATTCCCAAAATTGCAATGCACTGTATTGGATCTTCCACATGTTGTTTCTGGCTTGCAAGGGAGAGAGAACCTCAGATATGTAGGGGGAGACATGTTTAAGGCCATTCCTCCGGCCAATGCCACCTTGTTTAAGTGGGTATTATGCGATTGGAGCGACGAAGACTGTGTGGAGATACTGAAGAAATGCAAGGAGGCAATTGAAAGCAAAGGCAAAGAAGGGAAGGTGATAATCATAGACATGGTTATTGAGAATGAGAAGGGAGATGATGAATCAGTTGAAACAGAATTGTTGTTTGATATGATGGCGATGGTGGCAGTcaagggaagagagagaaatgagaaagaatGGAGAGAGTTATTTCTCTCTGCCGGTTTCAACAACTACAAGATAACTCCGCAGGTTCTGGGCTCAAGATCTGTCATTGaggtttatcttttata 1079 0.4115 MEFHNEVDASKMLVAQTHIINHIFSYVNSMSLRCAVDLGIPDIIHSHGQPMPLSQLISSLPIHPSKSRYVYRLMRFLIHSGFFAQQKVSEDDPEEGYILTDASTLLLKDNPSSVTPLLLLGTDPTFIKSGLEFSAWFQNDDTTLFETANGMSLWEYTSKHPEFSQVLNEAMGNDATLVSSRVIEKCKGVFEGLESLVDVGGGTGNLAKAIAKEFPKLQCTVLDLPHVVSGLQGRENLRYVGGDMFKAIPPANATLFKWVLCDWSDEDCVEILKKCKEAIESKGKEGKVIIIDMVIENEKGDDESVETELLFDMMAMVAVKGRERNEKEWRELFLSAGFNNYKITPQVLGSRSVIEVYLL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01955 359 Pfam O-methyltransferase domain 135 339 IPR001077 GO:0008171
Bva07g01955 359 CDD AdoMet_MTases 196 291 - -
Bva07g01955 359 PANTHER O-METHYLTRANSFERASE 8 357 IPR016461 GO:0008168
Bva07g01955 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 356 IPR029063 -
Bva07g01955 359 Pfam Dimerisation domain 30 77 IPR012967 GO:0046983
Bva07g01955 359 SUPERFAMILY "Winged helix" DNA-binding domain 12 111 IPR036390 -
Bva07g01955 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 358 IPR016461 GO:0008168
Bva07g01955 359 PANTHER O-METHYLTRANSFERASE 8 357 - -
Bva07g01955 359 Gene3D Vaccinia Virus protein VP39 107 357 IPR029063 -
Bva07g01955 359 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Bva07g01955 359 Gene3D - 2 106 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01955 Bva-Chr7 17246953 17248445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01955 30 349 Monolignol Biosynthesis Gene Families AT5G54160 32.727 1.93e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01955 - K16040 gmx:100781008 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01955 07 17246953 17248445 Bva07g01955 07 17246953 17248445 ECH