Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01947 ATGCAAAGAAATAATAACAGTGGATCAAATCAAGCATGTGCTGCATGCAAGcatcaaaggaagaaatgcAGTGAAAACTGTGCATTGGCACCTTATTTCCCAGCAAGCAGAAACCACGAATTCCATGCAGTACACAAGGTCTTCGGTGTCAGcaacataacaaaaatagtGAAGAATGCTAAGGAAGAAGATCGAAGAAGAGTTGTGGATTCATTAATCTGGGAAGCATTTTGCAGGCAAAAGGATCCAATACTAGGTCCTTATGGAGAATATAGAAAGGTGTatgatgaatataaaaaagctTTTGACGAGCTTAAGATATACAGAAGCCAACAAAACCAGGTGCTGCAATTACCATCTCAGCAGGGAAATGTGAACTTCAAGTCTCTTCAAGATTTGGTTGCATGGAATGGAACCAAGGGGATACTTAAGGAAGAAGGAGTTGATAATGCATTGAGTTATGCTCATGACCATAGTGAGATTAATGCTAATAATATTGATTCTACTGTTTATACTTACCATCACTCAAACTATTTACAAAGTCTAGAGGATATGAGGCCAGAAGCCATCACTCAACCGTACTATATTTCAGGACGTCAGTACAGTCAAATGAATAGCAAGAGCATGGAAGGCAGCATATGGGAAGGCGAACCTTG 656 0.3704 MQRNNNSGSNQACAACKHQRKKCSENCALAPYFPASRNHEFHAVHKVFGVSNITKIVKNAKEEDRRRVVDSLIWEAFCRQKDPILGPYGEYRKVYDEYKKAFDELKIYRSQQNQVLQLPSQQGNVNFKSLQDLVAWNGTKGILKEEGVDNALSYAHDHSEINANNIDSTVYTYHHSNYLQSLEDMRPEAITQPYYISGRQYSQMNSKSMEGSIWEGEP 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01947 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 4 188 - -
Bva07g01947 218 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 188 - -
Bva07g01947 218 Pfam Lateral organ boundaries (LOB) domain 12 107 IPR004883 -
Bva07g01947 218 ProSiteProfiles LOB domain profile. 11 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01947 Bva-Chr7 17209030 17209912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01947 11 110 AS2 family AT1G06280 60.000 1.57e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva07g01947 LOB 1.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01947 - - gmx:100809173 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01947 07 17209030 17209912 Bva07g01947 07 17209030 17209912 ECH