Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01945 ATGGAAGCTTTTAATTGGAGCTCAGACATTCATGGTAATGCCCcagagaatatttttaatggttTTCTAGTTAACCATACCGTGTTAGGAAGTGGGAttccttcatcttcatctctGGTTTTGGATAGCGAGAGAGGAGAGCTTGTGGAAGCTCCTGCCAAGTTGGAGCGAAAGGGTGTCTCCACTGAGAGAAGTATTGCTGCTTTGAAAAACCATAGCGAGGCAGAGCGGAGAAGAAGAGCAAGGGTTAATTCTCATCTTGATACGCTTCGCAGTGTGATTCCAGGAGCTAAGAAGATGGACAAAGCATCATTACTGGCAGAGGTTATTAGACATTTAAAAGACCTGAAAAGGAATGCAGCGCAAGCTTGTGAAGGTTTAATGATACCAAATGACAGCGATGAAATAAGAGTTGAAGAACAGGAAGAAATTGCAACCTTGGGAGGCTGGATGAAGAATGTCTTTGTGATTATTAGCTGCAAACAACAGAACATTGAAGATGCTGAATATCGTCAACTTCTTGCTGGTTCTGTTCACCAAGCTCTTAGGTCTGTACTTGATAGATTTTCAACTTCACAGGATCTCTTAGGAACCCGAAAGAGACGAAGAATTTCAATATTCAGTTCATCATCATTAGAAGATTTCTTGCATGCATGGTGGACCACTATTTTTTGCTGCGTGGAGCTGATATGGCAAACCTG 701 0.4009 MEAFNWSSDIHGNAPENIFNGFLVNHTVLGSGIPSSSSLVLDSERGELVEAPAKLERKGVSTERSIAALKNHSEAERRRRARVNSHLDTLRSVIPGAKKMDKASLLAEVIRHLKDLKRNAAQACEGLMIPNDSDEIRVEEQEEIATLGGWMKNVFVIISCKQQNIEDAEYRQLLAGSVHQALRSVLDRFSTSQDLLGTRKRRRISIFSSSSLEDFLHAWWTTIFCCVELIWQT 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01945 233 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Bva07g01945 233 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 143 - -
Bva07g01945 233 PANTHER TRANSCRIPTION FACTOR BHLH30 143 215 IPR045847 GO:0003700|GO:0006355
Bva07g01945 233 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 143 215 - -
Bva07g01945 233 Pfam Helix-loop-helix DNA-binding domain 71 116 IPR011598 GO:0046983
Bva07g01945 233 PANTHER TRANSCRIPTION FACTOR BHLH30 1 143 IPR045847 GO:0003700|GO:0006355
Bva07g01945 233 SMART finulus 73 122 IPR011598 GO:0046983
Bva07g01945 233 Gene3D - 63 124 IPR036638 GO:0046983
Bva07g01945 233 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 120 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01945 Bva-Chr7 17199333 17201680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01945 53 205 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 34.184 5.54e-19 82.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva07g01945 HLH 7.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01945 - - gmx:100783322 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01945 07 17199333 17201680 Bva07g01945 07 17199333 17201680 ECH