Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva07g01930 ATGCGTGGACTCATACAAGATTATCGCCCTGATGATGACGACGACGATCGTTTTACCTTTTCTTTACATGATAGGAGTTCCCACAAAAGCGACTTTAACAGAAAGATTTTACTCACAGCTATCATCTCTTTATCGTTTGTCTTAGTTCTCGTCATTGCGCTTCACCTCTATGCTCGATGCGTTCTCAGGCGCCAAGCTCGTCGCCGAGCTGCTATTCACCAATTGAGCCTCACCGTGGCTCGTGCTCGTGATCATGCCCACTCCGTAGACCCACCAAACACAGGGCTCGACCCAATATTCATAGCTGCTCTCCCTATCTTCCTCTTCAAACGCAAGGAACACAATCAACAGAACGGTCACGATTCTTCAATAATGGAGTGTGCTGTGTGTTTGAGTGCTCtggaagatcaagaaatgGTGAGGCTGCTACCAAATTGTAACCATACTTTCCACGTGGGCTGTATTGACACATGGTTGGCTTCGCATTCTACCTGTCCCATTTGTCGAACCAAGGCTGAGCCACGGCTCGAACCACACCCGCGTGAGTCCCCTGCTGCTCCAGCTCCTGATGCACCGACGGCTCCACCATTGGATCAACAACCTTTAGAGGGCACATCAGATGGTGGATCAGCAAAAATCAATAGTTCCAATTCACGCATGAGCTCATTCAGAAGGATTCTTAGTAGGGAAAGATCGTCGAGAAGAATCCAACCTTCTAGCCAAGatgatcataatcataatactATTCAAGATTCGGAGAGACAGTG 767 0.4628 MRGLIQDYRPDDDDDDRFTFSLHDRSSHKSDFNRKILLTAIISLSFVLVLVIALHLYARCVLRRQARRRAAIHQLSLTVARARDHAHSVDPPNTGLDPIFIAALPIFLFKRKEHNQQNGHDSSIMECAVCLSALEDQEMVRLLPNCNHTFHVGCIDTWLASHSTCPICRTKAEPRLEPHPRESPAAPAPDAPTAPPLDQQPLEGTSDGGSAKINSSNSRMSSFRRILSRERSSRRIQPSSQDDHNHNTIQDSERQ 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva07g01930 255 MobiDBLite consensus disorder prediction 181 196 - -
Bva07g01930 255 SUPERFAMILY RING/U-box 126 176 - -
Bva07g01930 255 SMART ring_2 127 168 IPR001841 -
Bva07g01930 255 CDD RING-H2_PA-TM-RING 126 169 - -
Bva07g01930 255 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 27 255 - -
Bva07g01930 255 MobiDBLite consensus disorder prediction 224 255 - -
Bva07g01930 255 MobiDBLite consensus disorder prediction 199 223 - -
Bva07g01930 255 Pfam Ring finger domain 126 169 IPR001841 -
Bva07g01930 255 MobiDBLite consensus disorder prediction 175 255 - -
Bva07g01930 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 175 IPR013083 -
Bva07g01930 255 PANTHER RING FINGER DOMAIN-CONTAINING 27 255 - -
Bva07g01930 255 ProSiteProfiles Zinc finger RING-type profile. 127 169 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva07g01930 Bva-Chr7 17142478 17143499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva07g01930 11 254 C3H Transcription Factor Family AT2G42360 43.775 9.53e-54 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva07g01930 K19038 - gmx:100780265 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva07g01930 07 17142478 17143499 Bva07g01930 07 17142478 17143499 ECH